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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
83123 |
Common Name | SELMODRAFT_450231 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
GRAS |
Protein Properties |
Length: 295aa MW: 34052.4 Da PI: 7.9385 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
83123 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 175.8 | 3.3e-54 | 4 | 283 | 89 | 374 |
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
P l+ + aNq+Ilea g++rvHi+D++i +G QWp+L++aL++R+egpp ++iTg++ p+ +le+tg+rL ++Ae++g+++ef+ +++ ++e+ +++
83123 4 PSLRATERFANQMILEACRGAKRVHIVDYGILYGDQWPSLIKALSERAEGPPLFKITGIDFPS---LVNLEKTGNRLVDYAESCGMHLEFHSIATAAWESAQPR 104
677777889****************************************************65...899***********************988899998776 PP
GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres..eerikvErellgrei 294
E l Vn++l++ ++ e++ ++s+r+ + + + s +P ++ + a+++s+ F +rf a + + a ++s+e+++ + + +++++ +
83123 105 YH--LFSELLFVNCQLRMRHIR-EDGIIDSPRKLFFEKILSFKPVMFFQSVVHAEMGSPFFIHRFDGAWRSFLARLESFEETMKLGLidQSQLDFMDKFIEKCA 205
43..238*************96.9999**********************99****************************88865544435555555555***** PP
GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ ++ac g++r+er ++++W + ++ F+++p+s++a + + ++ + ++ ++ ++++l+lgWkd L ++S+W+
83123 206 MGAIACDGQNRVERISSYKTWDRLARKGQFGQLPVSKQAFEMVMSVWSGHE--NFTYGMDENWLLLGWKDVILNALSVWK 283
****************************************99999998888..59************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MNLPSLRATE RFANQMILEA CRGAKRVHIV DYGILYGDQW PSLIKALSER AEGPPLFKIT 60 GIDFPSLVNL EKTGNRLVDY AESCGMHLEF HSIATAAWES AQPRYHLFSE LLFVNCQLRM 120 RHIREDGIID SPRKLFFEKI LSFKPVMFFQ SVVHAEMGSP FFIHRFDGAW RSFLARLESF 180 EETMKLGLID QSQLDFMDKF IEKCAMGAIA CDGQNRVERI SSYKTWDRLA RKGQFGQLPV 240 SKQAFEMVMS VWSGHENFTY GMDENWLLLG WKDVILNALS VWKPIEKLPR FKHQ*
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