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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
82663 |
Common Name | SELMODRAFT_450176 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
GRAS |
Protein Properties |
Length: 306aa MW: 34962.4 Da PI: 8.2881 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
82663 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 180.6 | 1.2e-55 | 19 | 302 | 89 | 374 |
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
P +++++ a I + +g++r+Hi+D++i++G QWp ++aL++Rp+gpp ++iTg++ + ++etg++L +fA+++gv+++f++++++++e ++++
82663 19 PSFRVTQRFAACNIFNVCQGAKRIHIVDYGIQYGCQWPHVIKALSQRPQGPPAMKITGIDL----PRVDVKETGRNLVEFARSCGVSLDFDAITSTSWELVQPK 118
899999999999*************************************************....89*************************999999999886 PP
GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvv..vveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellgre 293
++ ++ l+Vn+ l+l +l ++ +++r+ + + v sl+P++++ v + ++++s+ F +rf l++ + ++ +e+ l +e+ e+ +++++
82663 119 ---THVEDLLIVNCNLRLRHLREDGSVGNNPRKLFFEKVYSLKPDLFIqcVLDATSNLSSPFFIQRFEGVLDTLFTRMELFETLLLQEDmPEEYDFMGSIIAKA 219
...56899*************866666666****************983344566777999******999999888888888877777766666666666**** PP
GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll.rkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
i++vva eg er+er +++++W +r ++aGF+ +p++ ++ + +k + + k ++ +++ + ++l+lgWk+ ++++SaWr
82663 220 IMDVVALEGVERIERANSYRTWDSRARRAGFELLPVRLETIEVVKDVWcSSSKlNNNFKLGVDGHWLLLGWKESIVFAMSAWR 302
********************************9998876655555443033334577*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MVKGIRERHS VHVRLLNLPS FRVTQRFAAC NIFNVCQGAK RIHIVDYGIQ YGCQWPHVIK 60 ALSQRPQGPP AMKITGIDLP RVDVKETGRN LVEFARSCGV SLDFDAITST SWELVQPKTH 120 VEDLLIVNCN LRLRHLREDG SVGNNPRKLF FEKVYSLKPD LFIQCVLDAT SNLSSPFFIQ 180 RFEGVLDTLF TRMELFETLL LQEDMPEEYD FMGSIIAKAI MDVVALEGVE RIERANSYRT 240 WDSRARRAGF ELLPVRLETI EVVKDVWCSS SKLNNNFKLG VDGHWLLLGW KESIVFAMSA 300 WRTSK*
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