PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 68227 | ||||||||
Common Name | BLH2-1, SELMODRAFT_68227 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family | TALE | ||||||||
Protein Properties | Length: 178aa MW: 20556.7 Da PI: 10.1504 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.2 | 1.3e-08 | 144 | 177 | 19 | 50 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqN 50 Fe ++yp+ +++ LA+++gLt +qV++WF N 68227 144 FEHflHPYPKDADKMMLARQTGLTRSQVSNWFIN 177 665559**************************98 PP | |||||||
2 | BELL | 125.4 | 2.2e-40 | 5 | 76 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qel+ kk+kL+ +l+eVd+rY+qy++q+q+vissF+avag+g+a+pYt+lAl+a+Sr FrcLkdai++qi 68227 5 EKQELETKKSKLIAMLQEVDRRYRQYYDQMQVVISSFDAVAGVGAATPYTALALQAMSRYFRCLKDAITGQI 76 689********************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07526 | 1.7E-36 | 1 | 73 | IPR006563 | POX domain |
SMART | SM00574 | 1.9E-19 | 2 | 74 | IPR006563 | POX domain |
SuperFamily | SSF46689 | 9.84E-14 | 119 | 178 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 10.787 | 122 | 178 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 1.1E-22 | 124 | 178 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 5.18E-9 | 125 | 178 | No hit | No description |
Pfam | PF05920 | 1.2E-16 | 142 | 178 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence Send to blast |
LSAEEKQELE TKKSKLIAML QEVDRRYRQY YDQMQVVISS FDAVAGVGAA TPYTALALQA 60 MSRYFRCLKD AITGQISLVC KSLGEEDISK QITTKSPTSR LRFIDQQIRQ QRAFQQLGML 120 NQHAWRPQRG LPERSVSILR AWLFEHFLHP YPKDADKMML ARQTGLTRSQ VSNWFINA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002969077.2 | 1e-125 | BEL1-like homeodomain protein 2 | ||||
Refseq | XP_002992851.2 | 1e-126 | BEL1-like homeodomain protein 2 | ||||
Refseq | XP_024529520.1 | 1e-125 | BEL1-like homeodomain protein 2 | ||||
Swissprot | Q9SIW1 | 2e-83 | BLH7_ARATH; BEL1-like homeodomain protein 7 | ||||
TrEMBL | D8RCT5 | 1e-130 | D8RCT5_SELML; Uncharacterized protein BLH2-1 (Fragment) | ||||
STRING | EFJ30193 | 1e-131 | (Selaginella moellendorffii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP133 | 16 | 172 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16400.1 | 9e-73 | BEL1-like homeodomain 7 |
Link Out ? help Back to Top | |
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Phytozome | 68227 |
Entrez Gene | 9658633 |
Publications ? help Back to Top | |||
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