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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
6792 |
Common Name | SELMODRAFT_6791, SELMODRAFT_6792 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
HD-ZIP |
Protein Properties |
Length: 140aa MW: 16145.7 Da PI: 9.747 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
6792 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 59.4 | 5.7e-19 | 14 | 68 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Le+ F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
6792 14 RKKLRLSKEQSALLEKSFKEHSTLNPKQKNALAKHLNLRPRQVEVWFQNRRARTK 68
788899***********************************************98 PP
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2 | HD-ZIP_I/II | 127 | 7.9e-41 | 14 | 102 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rlskeq++lLE+sF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E d+e Lkr++++l+een+rL+ke +eLr +
6792 14 RKKLRLSKEQSALLEKSFKEHSTLNPKQKNALAKHLNLRPRQVEVWFQNRRARTKLKQTEIDCELLKRCCETLTEENRRLQKELQELR-A 102
69*************************************************************************************9.4 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 140 aa
Download sequence Send
to blast |
VSSRGSDEED GAPRKKLRLS KEQSALLEKS FKEHSTLNPK QKNALAKHLN LRPRQVEVWF 60 QNRRARTKLK QTEIDCELLK RCCETLTEEN RRLQKELQEL RAIKVPPPCV ISQDFYMPLP 120 AATLTMCPSC ERLAAVDTRS
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor. {ECO:0000250}. |