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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678473756 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | G2-like | ||||||||
Protein Properties | Length: 132aa MW: 15132.4 Da PI: 9.8612 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 28.7 | 2.9e-09 | 92 | 113 | 1 | 22 |
G2-like 1 kprlrWtpeLHerFveaveqLG 22 kpr++W+ +LH++Fv+av+q+G 678473756 92 KPRVVWSVDLHQKFVQAVNQIG 113 79*******************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50110 | 14.541 | 1 | 39 | IPR001789 | Signal transduction response regulator, receiver domain |
Gene3D | G3DSA:3.40.50.2300 | 2.7E-11 | 1 | 61 | No hit | No description |
SuperFamily | SSF52172 | 3.98E-7 | 2 | 46 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:1.10.10.60 | 1.0E-8 | 91 | 118 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence Send to blast |
MSVDGETSRV MKGVQHGACD YLLKPIRMKE LRNIWQHVFR KRIHEGGIEE TQYMKSSVER 60 SEDGNCVTGK RKKDEERACS DASSSSTNMI KKPRVVWSVD LHQKFVQAVN QIGLESKNLK 120 LRCSKQKSFP CC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678473756 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011071178.1 | 8e-47 | two-component response regulator ORR26 | ||||
Swissprot | Q5N6V8 | 2e-40 | ORR26_ORYSJ; Two-component response regulator ORR26 | ||||
TrEMBL | A0A2G9I9H3 | 2e-44 | A0A2G9I9H3_9LAMI; Uncharacterized protein | ||||
STRING | VIT_01s0010g02230.t01 | 5e-42 | (Vitis vinifera) | ||||
STRING | Migut.E00229.1.p | 4e-42 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6788 | 24 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-33 | response regulator 11 |
Publications ? help Back to Top | |||
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