PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | 678471639 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 174aa MW: 19920.5 Da PI: 6.2189 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.8 | 3.9e-05 | 108 | 129 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C++C+ +F + s+L+ Hi H 678471639 108 CSICDWRFATISELMIHITEnH 129 ******************8877 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00355 | 60 | 67 | 90 | IPR015880 | Zinc finger, C2H2-like |
SMART | SM00355 | 0.33 | 106 | 129 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 108 | 129 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 174 aa Download sequence Send to blast |
MTSDRRSRDL NPYSHVEFCF GGRCPPYIPR YELQAAAHGL RNCWVALNYV GTGKPSNAVL 60 GWPADRWPCF LCSSSEPWAM NLHNHVTNEH SFLHEKFLAG WLPWFENCSI CDWRFATISE 120 LMIHITENHP EIAVEARRVL TDFRVTLEEH SARDGLVQVA DPEPIIPFSS PNQA |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | 678471639 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |