PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678470810
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 377aa    MW: 41265.5 Da    PI: 6.3968
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678470810genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.77.2e-1597140247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      grWT+eE+e ++++ k++G++ Wk++a+++  +Rt  q + + qky
        678470810  97 GRWTKEEHEAFLQGLKLYGKE-WKKVAAKVR-TRTVVQTRTHAQKY 140
                      9********************.*********.*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.83591145IPR017930Myb domain
SuperFamilySSF466895.23E-1493146IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-995144IPR009057Homeodomain-like
SMARTSM007173.8E-1295143IPR001005SANT/Myb domain
PfamPF002492.0E-1296140IPR001005SANT/Myb domain
CDDcd001673.55E-1098141No hitNo description
TIGRFAMsTIGR015579.6E-1198143IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
GWVSPNPFFD NAAFEPLLVL LAADDDDDDD ADADMNNNFE VDNDEDMEQD TNSMNRNNHH  60
EELFHYEHTQ QQQPPPPPSQ SLSQGSHSAS GVEEHTGRWT KEEHEAFLQG LKLYGKEWKK  120
VAAKVRTRTV VQTRTHAQKY FQKLQKSIQD SATNKRRAGG NNSHNAEYGD DMRDGQYAHD  180
DETQRMIAIM NSNNSLNDDD NEDEDGFTST AVFSTASTRG RGSSTRGRGG RRGAAANNTS  240
SGSKAALSKK GFGLTQPQPL LPPPPVTAMN IMKNNIGAAS INQTPSHQLR RGSTATLNAA  300
QVISTLSSAK TGDNNTTKQQ TAGSIIHSTP SRVDHKNYFT SNNNTTLSSS SNMKITAPDP  360
SRMGRHYAFP EPSPAAX
Cis-element ? help Back to Top
SourceLink
PlantRegMap678470810
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-