PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678470125
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 285aa    MW: 30872 Da    PI: 5.8362
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678470125genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.66.6e-393188461
     zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
               +alkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvP+Ggg+rk k++
  678470125 31 QALKCPRCDSQNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPIGGGCRKTKRA 88
               789****************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-272187IPR003851Zinc finger, Dof-type
PfamPF027012.6E-333287IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.6463387IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103571IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MQDIHAVGGG PFLGGGDRRM RAHNHPNNHL QALKCPRCDS QNTKFCYYNN YNLSQPRHFC  60
KNCRRYWTKG GVLRNVPIGG GCRKTKRANQ RRGAARERTQ STSSTDSSNN HTIAASSSSA  120
VVEEPSAATK AASISAAVYD FPDSSFFNAN PSFDNRQPLV THPSDAQIFP SEIGGYASLM  180
EPAPASEMMV YGVVPCPTTS YPEALHDSTT TTTTLESCNQ AVEEIKLPEI EGELNCGDIS  240
AAPEWASSGG GEDQGLFDLT AAVDPAYWSQ PPWTDTDQSS LNFLP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00570DAPTransfer from AT5G60850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678470125
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078663.14e-85dof zinc finger protein DOF5.4
TrEMBLS8CHK71e-85S8CHK7_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.16e-46OBF binding protein 4