PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678468603
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 160aa    MW: 17666.6 Da    PI: 5.6646
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678468603genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding249.4e-081242448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++Ia +++ gRt++++k++w+++l
        678468603  1 WTLIAGRLP-GRTANDVKNFWNSHL 24
                     9********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001678.58E-6124No hitNo description
PfamPF002498.7E-6124IPR001005SANT/Myb domain
PROSITE profilePS5129415.647128IPR017930Myb domain
SuperFamilySSF466896.12E-6128IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-9136IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
WTLIAGRLPG RTANDVKNFW NSHLQKKVPA PAIAEDGDTG KSDSVQETSV IKPRPLKLSH  60
TRNPRYKPAQ FSGGESAVPR NRTRFSKSPS LDYLADEDIA INGGDACEAS SSRWWNELLE  120
TAEKWDHGEN PVGFSEEAME PPAATPGTTV DFRHLMFGDM
Cis-element ? help Back to Top
SourceLink
PlantRegMap678468603
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1982322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.13e-14myb domain protein 113