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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678463310 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | GeBP | ||||||||
Protein Properties | Length: 107aa MW: 12451.1 Da PI: 6.9701 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 68.2 | 1.7e-21 | 45 | 101 | 1 | 56 |
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.spsddidafyefvkksisfkvsksqlve 56 klfqrlw++eDei lLqG+id+++++g+ +++ d+ fy+++k +++f++sk+qlv+ 678463310 45 KLFQRLWTDEDEIELLQGFIDYTTRRGSsQQYPDTATFYDQIKTKLQFDFSKNQLVQ 101 589************************966677**********************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 4.9E-17 | 47 | 101 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence Send to blast |
MKRTILPPPQ LPHSVSQVTI AVPDPHLQQH IPESKRPVPP DESRKLFQRL WTDEDEIELL 60 QGFIDYTTRR GSSQQYPDTA TFYDQIKTKL QFDFSKNQLV QLPSALH |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678463310 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012837927.1 | 3e-33 | PREDICTED: uncharacterized protein LOC105958472 | ||||
Swissprot | Q9CAV7 | 5e-25 | STKLJ_ARATH; Probable transcription factor At3g04930 | ||||
TrEMBL | A0A2G9GWT9 | 1e-33 | A0A2G9GWT9_9LAMI; Uncharacterized protein | ||||
STRING | Migut.N01942.1.p | 1e-32 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4052 | 24 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 1e-27 | DNA-binding storekeeper protein-related transcriptional regulator |