PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678461507
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 402aa    MW: 43941 Da    PI: 6.8999
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678461507genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.0011151173123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ++C+ C+k+F+++  L  H  +H
  678461507 151 FECKACNKVFNSHQALGGHRASH 173
                89**************9999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.01E-6150173No hitNo description
PfamPF139123.4E-10150175IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.305151178IPR007087Zinc finger, C2H2
SMARTSM003550.057151173IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280153173IPR007087Zinc finger, C2H2
SuperFamilySSF576675.01E-6222249No hitNo description
SMARTSM003551.4227249IPR015880Zinc finger, C2H2-like
PfamPF139126.0E-13227250IPR007087Zinc finger, C2H2
PROSITE patternPS000280229249IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MYQLRTNPNR LKSCKNCGKE FLSWKSFLEH GKCNSDDASE SFISLAESDG DEEDGDGAPR  60
GSGLFRRKRS LRSSIGCVDA SYLAIEDDDI LLARCLVELA NTVVHSTPVE PEESCASASR  120
EDERQNPNLL TGGMFDYKGK GVSISSPKGV FECKACNKVF NSHQALGGHR ASHKKFKGCF  180
ATKTEETHSL IAEDEAILNE ELAPSRQFLR NNDDTGTHST KKKTKIHGCS ICHRVFPSGQ  240
ALGGHKRCHW IRSNAPATPS IPPKFHLSNN SIDPGIPPKL TLEMSHRLDL NVSAWAHFSA  300
VQRTPNNLLS FEVPTDIHLR AGGDVNNETE NENKNSNRMA PAREENNGGM RVEDEADSKM  360
KMGKVTDLKE MSKNGESSQW LQVGIGSTTQ PGTAAAAAAC DL
Cis-element ? help Back to Top
SourceLink
PlantRegMap678461507
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090189.11e-131uncharacterized protein LOC105170939
TrEMBLA0A2G9HTX71e-124A0A2G9HTX7_9LAMI; Uncharacterized protein
STRINGVIT_15s0021g02710.t011e-108(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19102243
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17180.16e-23C2H2-like zinc finger protein