PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678458454
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 609aa    MW: 66595.1 Da    PI: 7.9541
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678458454genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.73.7e-17394440455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 hn  ErrRRdriN+++  L+el+P++      Kl+Ka++L +A+eY+k+Lq
  678458454 394 VHNLSERRRRDRINEKMKALQELIPSC-----NKLDKASMLGEAIEYMKMLQ 440
                5*************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.46E-18386444No hitNo description
PROSITE profilePS5088818.177390439IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-20392466IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-14394440IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-20394448IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.0E-19396445IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    Send to blast
MHQNECSRIA GRKNESGDYF PFLNGFPSRL GDDLSELVWE NGQVSVQGQS SRPSFANNLP  60
CWAQNEAVGD QKAGMVYGIL PAVPSSESDL GLNSELTPWL DNFFDDAMEH EYGPHRLLEV  120
SAVMEHGLSG QNGSELGLSN LKAGEKCPPF SYKPYLLWSS QNPQKCSVSG SGVSDDVSNQ  180
TEFVFRNRDP GRDAFTDGWR RKSNSRMVNS PHCCIQKAAN LQDPVGIPAS GGSNSKNSDT  240
DVHVTSAPED PSNSMPELTR QVHNQDLSKG TGIGTEKLQL QSPEILEKYI SGSEVPVELN  300
VACSSVGSGH SAEVVSLDRK IQLKRKSCDP DDPGRHNHDD DVVYVAEEKH ALPRRVSASK  360
RSEVVEVETE HVDGKKPAPA RSTARSKRSR VPEVHNLSER RRRDRINEKM KALQELIPSC  420
NKLDKASMLG EAIEYMKMLQ FQVQFMSMGG RLCVQPVMFP QPMYPLLTPF LPMGAGKSPC  480
MVGSRFSVFP ASVPQVPHFT CPVTGPGASS MFRAPGSGLP VCGHPLKGPP RPSEQRPKPC  540
PINSRQTSIP STSCDSKQPP PPPVPDPVNP NSKIGVISHH PRQFSRESQV KVMKQSTRGV  600
KALPSHITS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1398403ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMap678458454
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49652437
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.23e-37phytochrome interacting factor 3