PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678457788
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 1479aa    MW: 163675 Da    PI: 7.0412
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678457788genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.33.2e-07854895346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +WT+eE e+++   + +G++ + +Ia+ +  ++t  +c+++++k
        678457788 854 PWTAEEREIFIGKLAAFGKD-FQRIASFLD-HKTIADCVEFYYK 895
                      8*****************99.*********.***********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.64E-12846899IPR009057Homeodomain-like
PROSITE profilePS5129315.253850901IPR017884SANT domain
SMARTSM007172.4E-7851899IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.0E-4854895IPR009057Homeodomain-like
PROSITE profilePS5129311.95410331084IPR017884SANT domain
SMARTSM007173.7E-610341082IPR001005SANT/Myb domain
SuperFamilySSF466893.2E-1010341084IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-410351078IPR009057Homeodomain-like
CDDcd001673.24E-510381076No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1479 aa     Download sequence    Send to blast
MPPEQLPWDR RDFRKHERSA SDTRFVSGSG GFGSRWRDPH DPHAPPPRSS HPPAHHHYQN  60
PQQPQRWYSG FRSSRPIVNV HHCCLLFGKV FSFMDAVNWT VLGHGKQGEW HVYSDEAARG  120
YLPFGSRHND RSFEDDGSRH LGRHGDERYV RNSRESRGVF THREWRSPNC RISAGSSGSG  180
KHIGEVGNQK PQEHAPCHNN QSNSGDAAIP VTFLPLDQHK SDLKVNCEDG PSCKSGSCKS  240
GQNIAPSSSL EKPLVELNSH RPIANASMPY NNGKVDELTT AVTVSPLHQH PPVSNEKHED  300
FGGADDVTRS VQRFEKENTL GSIDWRFLKW SRSGSLSSKC SSHGSFSSSK EDEAHHTSSM  360
GACAAYTVPR PSDNTNSRKK PRLGWGEGLA KYESKKVEGP DNVPEKIDLF SIPNTDTSHS  420
PSGNLRDKSP IHTNLPMSST SPSSVTCSFS PGMEEHESIK VAGIDQINAS IKSALGILPI  480
ADYKEPSFNL GSIDELSSVT NLSDLVNGLL QSNDQGWIET GYVKSTSMNT LLVWKANVLK  540
VLEVTESEID SLETQFRSLL GDSRSCCPHP SVRQSSTGDC GIIPCSKMFN ASSFTTGPSL  600
LNLAVPKDVN TGDPTCELED GKADSPLSNS CKLVDASLPK LFFKTLKHIE YPSTDPINSL  660
NSDQMYCRDV GDIYDSIISS NKDVASKVSD DLNKLLPFLG CSFDASTSSH ASSFQRSPLN  720
IKEKIMKRRQ ILQFSERVLI IKYNVFHHFW KEGRIVSLKK NRRKPHKKFD LFQTMCSIYR  780
SSSHSVGSLP KVPAEEIVDM VNSLLSNFPF KPCRSTLKMP SLILDRNTKS RFISNNGLVD  840
DPFADERERS VLNPWTAEER EIFIGKLAAF GKDFQRIASF LDHKTIADCV EFYYKNHKSE  900
CFSRAKRKSD CTKKKSRSSM YLVGARKMYR DSNAVSLDIL GEVANASNYI ETQLKYKSRI  960
YLGSSGFQNS PSGVCGSLSS EAMDSCITTS CDPADGNQEW KIQRQSLCIR RPLTPEITHC  1020
VDDESLEESC GEIDSTDWTD KEKSMFIHAV SVYGKDFLMI SRFLRTRSRD QCRIFFSKAR  1080
KCLRLDVIQP PEACIASDST GVDGGDTEGV CVMQNDSSIC NIISQEPFDD KPVKENKVSS  1140
GHEACAEVET TVESGSVVSK NVQKNDFFTS AEELKDNDTE KTGIMSCKVP IVSFTCDRTM  1200
TEHQQVSNES STVDAVSYML PKSDENGNAC DGKTSCAMPL QKNDLSRYMC SSSMLFPVPI  1260
KYQENSCSGD DFQNVCSRGV DAVHSQILRK TGCPSRHSVS FQSNPSNIPN GYHVSVTTCE  1320
RITWEADNKT QITSHCEECE HPRHQNDTAP QQLHFPGQNG TLPRCQSGED KPSRNGDLKL  1380
FGKVMITLEA KSISAESDGD GKCHKQEPLN PSSGTICPRL PDTTATLGLD HSSLHTIVKS  1440
SDCLPDGASV LPGKFLSRCN GLPGANVLQN LKQPQDDSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1757764LKKNRRKP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678457788
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A022RLK20.0A0A022RLK2_ERYGU; Uncharacterized protein
STRINGMigut.F01767.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59042332
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.11e-92MYB family protein