PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

678457788

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

MYB_related

Protein Properties

Length: 1479aa MW: 163675 Da PI: 7.0412

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678457788	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.3	3.2e-07	854	895	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE e+++ + +G++ + +Ia+ + ++t +c+++++k 678457788 854 PWTAEEREIFIGKLAAFGKD-FQRIASFLD-HKTIADCVEFYYK 895 8***************99.*****.*********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.64E-12	846	899	IPR009057	Homeodomain-like
PROSITE profile	PS51293	15.253	850	901	IPR017884	SANT domain
SMART	SM00717	2.4E-7	851	899	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	4.0E-4	854	895	IPR009057	Homeodomain-like
PROSITE profile	PS51293	11.954	1033	1084	IPR017884	SANT domain
SMART	SM00717	3.7E-6	1034	1082	IPR001005	SANT/Myb domain
SuperFamily	SSF46689	3.2E-10	1034	1084	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.4E-4	1035	1078	IPR009057	Homeodomain-like
CDD	cd00167	3.24E-5	1038	1076	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1479 aa Download sequence Send to blast
MPPEQLPWDR RDFRKHERSA SDTRFVSGSG GFGSRWRDPH DPHAPPPRSS HPPAHHHYQN 60 PQQPQRWYSG FRSSRPIVNV HHCCLLFGKV FSFMDAVNWT VLGHGKQGEW HVYSDEAARG 120 YLPFGSRHND RSFEDDGSRH LGRHGDERYV RNSRESRGVF THREWRSPNC RISAGSSGSG 180 KHIGEVGNQK PQEHAPCHNN QSNSGDAAIP VTFLPLDQHK SDLKVNCEDG PSCKSGSCKS 240 GQNIAPSSSL EKPLVELNSH RPIANASMPY NNGKVDELTT AVTVSPLHQH PPVSNEKHED 300 FGGADDVTRS VQRFEKENTL GSIDWRFLKW SRSGSLSSKC SSHGSFSSSK EDEAHHTSSM 360 GACAAYTVPR PSDNTNSRKK PRLGWGEGLA KYESKKVEGP DNVPEKIDLF SIPNTDTSHS 420 PSGNLRDKSP IHTNLPMSST SPSSVTCSFS PGMEEHESIK VAGIDQINAS IKSALGILPI 480 ADYKEPSFNL GSIDELSSVT NLSDLVNGLL QSNDQGWIET GYVKSTSMNT LLVWKANVLK 540 VLEVTESEID SLETQFRSLL GDSRSCCPHP SVRQSSTGDC GIIPCSKMFN ASSFTTGPSL 600 LNLAVPKDVN TGDPTCELED GKADSPLSNS CKLVDASLPK LFFKTLKHIE YPSTDPINSL 660 NSDQMYCRDV GDIYDSIISS NKDVASKVSD DLNKLLPFLG CSFDASTSSH ASSFQRSPLN 720 IKEKIMKRRQ ILQFSERVLI IKYNVFHHFW KEGRIVSLKK NRRKPHKKFD LFQTMCSIYR 780 SSSHSVGSLP KVPAEEIVDM VNSLLSNFPF KPCRSTLKMP SLILDRNTKS RFISNNGLVD 840 DPFADERERS VLNPWTAEER EIFIGKLAAF GKDFQRIASF LDHKTIADCV EFYYKNHKSE 900 CFSRAKRKSD CTKKKSRSSM YLVGARKMYR DSNAVSLDIL GEVANASNYI ETQLKYKSRI 960 YLGSSGFQNS PSGVCGSLSS EAMDSCITTS CDPADGNQEW KIQRQSLCIR RPLTPEITHC 1020 VDDESLEESC GEIDSTDWTD KEKSMFIHAV SVYGKDFLMI SRFLRTRSRD QCRIFFSKAR 1080 KCLRLDVIQP PEACIASDST GVDGGDTEGV CVMQNDSSIC NIISQEPFDD KPVKENKVSS 1140 GHEACAEVET TVESGSVVSK NVQKNDFFTS AEELKDNDTE KTGIMSCKVP IVSFTCDRTM 1200 TEHQQVSNES STVDAVSYML PKSDENGNAC DGKTSCAMPL QKNDLSRYMC SSSMLFPVPI 1260 KYQENSCSGD DFQNVCSRGV DAVHSQILRK TGCPSRHSVS FQSNPSNIPN GYHVSVTTCE 1320 RITWEADNKT QITSHCEECE HPRHQNDTAP QQLHFPGQNG TLPRCQSGED KPSRNGDLKL 1380 FGKVMITLEA KSISAESDGD GKCHKQEPLN PSSGTICPRL PDTTATLGLD HSSLHTIVKS 1440 SDCLPDGASV LPGKFLSRCN GLPGANVLQN LKQPQDDSG

Sequence ? help Back to Top

Protein Sequence Length: 1479 aa Download sequence Send to blast

MPPEQLPWDR RDFRKHERSA SDTRFVSGSG GFGSRWRDPH DPHAPPPRSS HPPAHHHYQN  60
PQQPQRWYSG FRSSRPIVNV HHCCLLFGKV FSFMDAVNWT VLGHGKQGEW HVYSDEAARG  120
YLPFGSRHND RSFEDDGSRH LGRHGDERYV RNSRESRGVF THREWRSPNC RISAGSSGSG  180
KHIGEVGNQK PQEHAPCHNN QSNSGDAAIP VTFLPLDQHK SDLKVNCEDG PSCKSGSCKS  240
GQNIAPSSSL EKPLVELNSH RPIANASMPY NNGKVDELTT AVTVSPLHQH PPVSNEKHED  300
FGGADDVTRS VQRFEKENTL GSIDWRFLKW SRSGSLSSKC SSHGSFSSSK EDEAHHTSSM  360
GACAAYTVPR PSDNTNSRKK PRLGWGEGLA KYESKKVEGP DNVPEKIDLF SIPNTDTSHS  420
PSGNLRDKSP IHTNLPMSST SPSSVTCSFS PGMEEHESIK VAGIDQINAS IKSALGILPI  480
ADYKEPSFNL GSIDELSSVT NLSDLVNGLL QSNDQGWIET GYVKSTSMNT LLVWKANVLK  540
VLEVTESEID SLETQFRSLL GDSRSCCPHP SVRQSSTGDC GIIPCSKMFN ASSFTTGPSL  600
LNLAVPKDVN TGDPTCELED GKADSPLSNS CKLVDASLPK LFFKTLKHIE YPSTDPINSL  660
NSDQMYCRDV GDIYDSIISS NKDVASKVSD DLNKLLPFLG CSFDASTSSH ASSFQRSPLN  720
IKEKIMKRRQ ILQFSERVLI IKYNVFHHFW KEGRIVSLKK NRRKPHKKFD LFQTMCSIYR  780
SSSHSVGSLP KVPAEEIVDM VNSLLSNFPF KPCRSTLKMP SLILDRNTKS RFISNNGLVD  840
DPFADERERS VLNPWTAEER EIFIGKLAAF GKDFQRIASF LDHKTIADCV EFYYKNHKSE  900
CFSRAKRKSD CTKKKSRSSM YLVGARKMYR DSNAVSLDIL GEVANASNYI ETQLKYKSRI  960
YLGSSGFQNS PSGVCGSLSS EAMDSCITTS CDPADGNQEW KIQRQSLCIR RPLTPEITHC  1020
VDDESLEESC GEIDSTDWTD KEKSMFIHAV SVYGKDFLMI SRFLRTRSRD QCRIFFSKAR  1080
KCLRLDVIQP PEACIASDST GVDGGDTEGV CVMQNDSSIC NIISQEPFDD KPVKENKVSS  1140
GHEACAEVET TVESGSVVSK NVQKNDFFTS AEELKDNDTE KTGIMSCKVP IVSFTCDRTM  1200
TEHQQVSNES STVDAVSYML PKSDENGNAC DGKTSCAMPL QKNDLSRYMC SSSMLFPVPI  1260
KYQENSCSGD DFQNVCSRGV DAVHSQILRK TGCPSRHSVS FQSNPSNIPN GYHVSVTTCE  1320
RITWEADNKT QITSHCEECE HPRHQNDTAP QQLHFPGQNG TLPRCQSGED KPSRNGDLKL  1380
FGKVMITLEA KSISAESDGD GKCHKQEPLN PSSGTICPRL PDTTATLGLD HSSLHTIVKS  1440
SDCLPDGASV LPGKFLSRCN GLPGANVLQN LKQPQDDSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	757	764	LKKNRRKP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678457788

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A022RLK2	0.0	A0A022RLK2_ERYGU; Uncharacterized protein
STRING	Migut.F01767.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5904	23	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-92	MYB family protein