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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678455614 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | Trihelix | ||||||||
Protein Properties | Length: 348aa MW: 38577.5 Da PI: 5.7449 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 86.9 | 2.3e-27 | 37 | 131 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li+++r e+r+rrg +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e+k + e++s +++ ++l+ 678455614 37 RWTRQEILVLIQGKRVAESRVRRGPgsrsalgpsHVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESKIKMETESFWVMRNDLR 131 8**********************8444556666599********************************************999999999999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.4 | 37 | 103 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 1.7E-11 | 37 | 126 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 6.8E-5 | 37 | 102 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0050777 | Biological Process | negative regulation of immune response | ||||
GO:0071219 | Biological Process | cellular response to molecule of bacterial origin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence Send to blast |
MQFEAVNLGE GPVDGGVDGR QTSGNGDDGG KASRLPRWTR QEILVLIQGK RVAESRVRRG 60 PGSRSALGPS HVEPKWASVS SYCKRHGVNR GPVQCRKRWS NLAGDFKKIK EWESKIKMET 120 ESFWVMRNDL RRERKLPGFF DREVYDILDG SKGVAAADGE EHLDTEPLED VNSESRDEAG 180 PETLFDSGRS AAADDGLFSD FEEAGRSSGK RKETADEIPA PTPISVAEKH YQPDPQDPSG 240 QGTHTEKESR AEAEAEAGES GEGRKRKRHE VDVERKRYEA DVERGASSNI EQQLVAALEK 300 NGKILSSQLE AQNTHLQLDR EQRNQHVNSL LTVLNKLADA LGRIADKL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00288 | DAP | Transfer from AT2G33550 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678455614 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011086880.2 | 1e-147 | LOW QUALITY PROTEIN: trihelix transcription factor ASR3 | ||||
Swissprot | Q8VZ20 | 1e-101 | ASR3_ARATH; Trihelix transcription factor ASR3 | ||||
TrEMBL | A0A022QLL1 | 1e-139 | A0A022QLL1_ERYGU; Uncharacterized protein | ||||
STRING | Migut.K01061.1.p | 1e-146 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1786 | 24 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 5e-98 | Trihelix family protein |
Publications ? help Back to Top | |||
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