PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678451685
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 278aa    MW: 31044.1 Da    PI: 9.5175
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678451685genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.44.4e-071752151155
                HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  678451685 175 ARREKISERMRILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 215
                6******************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.995164214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0011170220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.98E-13174230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.39E-6176219No hitNo description
Gene3DG3DSA:4.10.280.106.2E-13177230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MDPAGSGMND AGVYNFSEIW KVFQVGPSST PYGYAVEPMA TERQKFTHNQ IASGTEKSKK  60
RRDGDEPARV RTSTSNSAPP NNNSSMSEGD AKRLKPLETS RETCNNEEPP RQDYIHVRAR  120
RGQATDSHSL AERVILEHSL LLSLKNIQRP RLSVTMKVFV HVSATFLLLL LYLQARREKI  180
SERMRILQDL VPGCNKVIGK ALVLDEIINY IQSLQRQIEF LSMKLEAANA RAALDGYPSK  240
DRFPQQALDA SFGSQSSRGY GRGSSTEWLH MQIGGGCE
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678451685
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071046.12e-77transcription factor bHLH79-like
SwissprotQ69WS32e-52BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A0H3YBU59e-82A0A0H3YBU5_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.L01368.1.p2e-73(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.17e-50BIG PETAL P