PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678449202
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 257aa    MW: 28210.4 Da    PI: 7.571
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678449202genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-10126173455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L+ l+P +    +k + Ka +L + ++YI+sLq
  678449202 126 SHSLAERARREKISERMKILQNLVPGC----NKVVGKALVLDEIINYIQSLQ 173
                8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.14E-10120177No hitNo description
SuperFamilySSF474598.64E-18120190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.739122172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.2E-18122190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-8126173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.6E-11128178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MDPRRVSVVS DGGEYGYSEM WPTFQMNYSV PSYNMSVDQI SVGEHVRSGK EGASTSNSNG  60
GNNSSSTVLN QGDAIRVKVM ESNENGESRT EVEGSSGQKD AKASKPADTP KDYIHVRARR  120
GQATDSHSLA ERARREKISE RMKILQNLVP GCNKVVGKAL VLDEIINYIQ SLQRQVEFLS  180
MKLEAVNSRL GIQQCQSKEV APASQQTQLF TLQFPQQSFV APSITFGSPN NGDFGRSSVP  240
SPEWLHMQIG GGFDRMS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678449202
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071046.16e-85transcription factor bHLH79-like
SwissprotQ69WS31e-57BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A2G9G2R34e-84A0A2G9G2R3_9LAMI; Uncharacterized protein
STRINGMigut.L01368.1.p2e-80(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-62BIG PETAL P