PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678448129
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 455aa    MW: 51168 Da    PI: 8.0066
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678448129genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00056389411123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                + Cp C+++F++   L  H r+H
  678448129 389 HACPFCDRVFKNGQALGGHKRSH 411
                67******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576677.54E-5833No hitNo description
PROSITE profilePS501579.3491032IPR007087Zinc finger, C2H2
SMARTSM003550.631032IPR015880Zinc finger, C2H2-like
PfamPF139120.00441032IPR007087Zinc finger, C2H2
PROSITE patternPS0002801232IPR007087Zinc finger, C2H2
SMARTSM003550.1292114IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.6692119IPR007087Zinc finger, C2H2
SuperFamilySSF576675.97E-693114No hitNo description
PfamPF139122.2E-793116IPR007087Zinc finger, C2H2
PROSITE patternPS00028094114IPR007087Zinc finger, C2H2
SuperFamilySSF576675.97E-6314338No hitNo description
SMARTSM00355250319339IPR015880Zinc finger, C2H2-like
PfamPF139128.2E-6319338IPR007087Zinc finger, C2H2
SMARTSM003550.029389411IPR015880Zinc finger, C2H2-like
PfamPF139121.3E-7389411IPR007087Zinc finger, C2H2
PROSITE profilePS501579.245389411IPR007087Zinc finger, C2H2
PROSITE patternPS000280391411IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MEEEGQQSKF VCKFCHKKFS CGKALGGHIR SHVVASSAES DERYQAIDTK MNLFPKEFDE  60
FGDGQNGYGL RDNPRKTMRA AVDSKAPLSE GRICKQCGKE FKSLKALCGH MACHSEKDKS  120
IKDGGSWNSE SHKMVMDGFS DTESDRKKLK SSRSFKTRQQ KKFAQSSPFS SVSEIDGQEQ  180
EELAMCLMLL SRDHMHKGGL HSFVESSDNH SDVLETKSSS NETEKLGNMM EKKMEISPLD  240
VELEDSDSEY FLADSAEIES NEKYGTEVWR KSSRRFDNDQ IGYGKSAKEK GNYEDGSRKG  300
KPVKTVEEQR ELISKRSKYE CFNCNKIFKS YQALGGHRPC NRRNNADFES RYGGLDEDQT  360
GSRDHNTLVQ PRSKSSSQKS ASVKPNKGHA CPFCDRVFKN GQALGGHKRS HFITGHDEAR  420
KRTPVMKPEL PDLLDLNLPA PEAGEYSGHS QLVSQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap678448129
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075585.11e-144uncharacterized protein LOC105160026
TrEMBLA0A2G9HWQ11e-131A0A2G9HWQ1_9LAMI; Uncharacterized protein
STRINGMigut.L01205.1.p1e-116(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.17e-43C2H2-like zinc finger protein