PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678447060
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 266aa    MW: 29431.2 Da    PI: 5.6946
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678447060genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY941.1e-29104160258
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                +Dgy+WrKYGqK++k+s++pr YYrCt ++C++kk+ver+a+dp++ ++tY g H h
  678447060 104 EDGYKWRKYGQKSIKNSPNPRCYYRCTNPRCSAKKQVERAADDPETYIVTYDGFHLH 160
                7******************************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081126.15498160IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.1E-28101160IPR003657WRKY domain
SuperFamilySSF1182909.42E-26101160IPR003657WRKY domain
SMARTSM007744.8E-33103162IPR003657WRKY domain
PfamPF031063.6E-25104160IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MEGLEEGTYC GDGLLQSLLL GGIPPLFMHT VGEEVPESDS GVPSFPGAPA LGYDSSEHAV  60
TTREIMNVSG LPVECMRKCS RSVHEESSFR YSMRIKSCDG VVGEDGYKWR KYGQKSIKNS  120
PNPRCYYRCT NPRCSAKKQV ERAADDPETY IVTYDGFHLH FTFPFLISDQ IDTPVKKQKR  180
PVLQAQEYMD LMQQSPLTGS WVEGLTGQKG LLEDVVAFTA RKPLKVAAAA DSRRASFSDD  240
TYPCASSPAS SNSFSWTSAY EYLGLI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-191041601874Probable WRKY transcription factor 4
2lex_A3e-191041601874Probable WRKY transcription factor 4
Cis-element ? help Back to Top
SourceLink
PlantRegMap678447060
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGGLYMA18G39970.21e-43(Glycine max)
STRINGMigut.J00318.1.p2e-43(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA120752124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.11e-37WRKY DNA-binding protein 49