PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678445569
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Trihelix
Protein Properties Length: 300aa    MW: 33432.6 Da    PI: 7.051
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678445569genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix476.7e-1516106186
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                +Wt++   +L++a  ++  +l+rg+l++++W+ev++ +     ++++ +r+ +qCk++++ l+k+yk +k    +   + +s++p+f++++
  678445569  16 CWTEEASATLVDAWGRRYLELNRGNLRQKDWQEVAAEVnalhgHSKKTRRTDVQCKNRIDTLKKKYKVEKVKIAESDGTMTSSWPFFSRMD 106
                7*****************************************999**********************9998888877888889******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.1E-2415107No hitNo description
Gene3DG3DSA:1.10.10.609.0E-41684IPR009057Homeodomain-like
PROSITE profilePS510298.80217113IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MVSEAPPRQT PTRDDCWTEE ASATLVDAWG RRYLELNRGN LRQKDWQEVA AEVNALHGHS  60
KKTRRTDVQC KNRIDTLKKK YKVEKVKIAE SDGTMTSSWP FFSRMDFLIG SSSSKPPSKP  120
NLSAPSSAGA HPTPIARLPS PPMALPLPYD RGHPCATPVV MPQKRPLSSA ALDGAYSLRN  180
YSAMAAAAAA AAEDEEVETD ADEEGSEDGD AQEEESWLQG MRKVAEAIEQ FGEMFERVEK  240
KKQKLILDLE KQRMLFVQDL EVRRMQWFTD TLAQQQRKKQ PKRSGSSDGT TSGIPSSLHA
Cis-element ? help Back to Top
SourceLink
PlantRegMap678445569
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101388.11e-105trihelix transcription factor ASIL1 isoform X3
TrEMBLA0A4D9AYE41e-104A0A4D9AYE4_SALSN; Uncharacterized protein
STRINGXP_009757835.17e-94(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.17e-38sequence-specific DNA binding transcription factors