PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678444380
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 716aa    MW: 78052.2 Da    PI: 6.3823
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678444380genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.37.3e-055585803254
                ..TTS-STCHHHHHHHHHHHHHH CS
        HLH  32 kapskKlsKaeiLekAveYIksL 54 
                +++s+K +Ka++L +A+eY+++L
  678444380 558 HNRSEKTDKASMLDQATEYLRML 580
                5699*****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF018833.9E-648108IPR002744Domain of unknown function DUF59
SuperFamilySSF1179165.56E-1048123No hitNo description
CDDcd000834.21E-4551585No hitNo description
SuperFamilySSF474594.32E-6558602IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-5560589IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0016226Biological Processiron-sulfur cluster assembly
GO:0042127Biological Processregulation of cell proliferation
GO:0051726Biological Processregulation of cell cycle
GO:1990067Biological Processintrachromosomal DNA recombination
GO:2001022Biological Processpositive regulation of response to DNA damage stimulus
GO:0010209Molecular Functionvacuolar sorting signal binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 716 aa     Download sequence    Send to blast
MIRLYWFSFC RRLEPPSFGT CGRLLAAFSV VNPTRDPTKP IKKKRIRIDP EHPFSLEQLK  60
VVTEDSIDVD DKKSYVRVTF TPTVEHCSLA TVIGLCLRVK LMRALPSRYK IDIRVAPGTH  120
ATEAAGVAHL DSIFRFHGGF SGPKCKLGKI CVSGPQKLMA DNDFAELVWE NGQLMVKSQA  180
PLTGSSHFAA SGAHADAEEE QSAFSKTGKF VDVETFLPDK PSLLSSGEVD LCPNDEVVPW  240
LGYPFGNYSE QQYSPKLLPE VSRDMGSGFS TYNNSVENMN GGGVSNVLHA CIDTSKASNF  300
PGETSVLLSP QDTRISGDAG FEVLDFSSTQ TEDKIEGRRK GLPMPASKWV NFPHFSKLTT  360
SLPKPSEVSS SVLSAERKLQ SRGKSLAVDD SSEKCRNPVL YDSRSKDAEF HGPFVSDAVS  420
NFEQPVINLL DEERNDVSEK DAAIINNEKC PTSVDWFNEI PGDGRSLETH VACSSTGIAP  480
GADLISCNQT KFDDNEDSQS HSNVGEWRSA FSIACFLYLL FIFLTDEQDS VSECDGSKRP  540
IPPRKSSGSK RRRIAEVHNR SEKTDKASML DQATEYLRML KHQVQVMSMG AGICMVPTML  600
PPGMQAVYPS RFTPFPQMGV GSGMGAGFGV GMPPDARFPM TPMQLPHLPM PVPGQASFAR  660
AACPSVWVYG HPGQVELPPP TFHPNSQHPV IPAAGVSGYG GQGEQPPRSP AAGDHP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ux2_A5e-21491232299MIP18 family protein FAM96A
3ux3_A5e-21491232299MIP18 family protein FAM96A
3ux3_B5e-21491232299MIP18 family protein FAM96A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1549553KRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMap678444380
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.32e-10bHLH family protein