PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678444286
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 212aa    MW: 23156.7 Da    PI: 9.9354
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678444286genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.12.9e-123682354
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h+e+ErrRR+riN  +++L+++lP        K +Ka+ L +Av+ +++L
  678444286 36 NSHKEAERRRRKRINGHIATLKSILPDV-----IKTDKASLLGEAVRRVREL 82
               68*************************7.....59***********998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.853382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-123684IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.1E-103682IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.68E-1337100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-103988IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550212.75E-6120190No hitNo description
CDDcd048731.31E-4123188No hitNo description
Gene3DG3DSA:3.30.70.2602.1E-6123189No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MFSSTNVYGV GSCSEIDNGN LSPRTMAEAK AAAASNSHKE AERRRRKRIN GHIATLKSIL  60
PDVIKTDKAS LLGEAVRRVR ELNKAAAELA PMNHHHQHHV LFPSETDELK VIPCDETGIV  120
KATICCEDRP ELVMELIEAL KAVEAKVVRA EMSTMGGRTK SVLWVRLSVG KESDAGLATL  180
RRGLKSVMDK STLLAGSIQG LPGSKRSRYY PN
Cis-element ? help Back to Top
SourceLink
PlantRegMap678444286
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022884570.12e-82transcription factor bHLH30-like
TrEMBLA0A2G9G2385e-92A0A2G9G238_9LAMI; Uncharacterized protein
STRINGMigut.H02300.1.p1e-73(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-31bHLH family protein