PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678444233
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 306aa    MW: 34117.3 Da    PI: 6.931
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678444233genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.2e-09145192455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  678444233 145 SHSLAERARREKISKKMKCLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 192
                8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-16139210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.24E-8139196No hitNo description
Gene3DG3DSA:4.10.280.101.7E-17141209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.237141191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-6145192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-10147197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MDMSLLQRHR LMLRQQARHS SLPISPDREN IVAHSLLDPR SLDGALQYDH TGAYSMVSNG  60
SCSSAAAPKT RRRCNSTVYG KRRPQNDIEE QEEEEETGEE KSEISIKAER ESSSCKDSFK  120
GPEAQKQNQS DYIHVRARRG QATDSHSLAE RARREKISKK MKCLQDLVPG CNKVTGKAGM  180
LDEIINYVQS LQKQVEFLSM KLVAVNRKLD FNPDNLFMKE APAAYAGCIT LSGATAVTQL  240
EPANPSCFHY NLIQQHGSSN PVSVDQAQSM PEKSSLSIPD TLLESSFTQV PSWDLDWQGL  300
LNAGFQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap678444233
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847836.12e-76PREDICTED: transcription factor HBI1-like
RefseqXP_012847837.12e-76PREDICTED: transcription factor HBI1-like
TrEMBLA0A022QLX65e-75A0A022QLX6_ERYGU; Uncharacterized protein
TrEMBLS8CWW32e-76S8CWW3_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.O00889.1.p8e-76(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36540.12e-48BR enhanced expression 2