PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678441948 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | bZIP | ||||||||
Protein Properties | Length: 252aa MW: 27929.8 Da PI: 8.4875 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.1 | 1e-14 | 170 | 229 | 2 | 60 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklk 60 ++l+r++r++kNRe+A rsR+RK+a++ eLe v +Le+eN +L ++++e+ kk ++l 678441948 170 ASLQRQKRMIKNRESAARSRERKQAYQVELESMVMKLEEENLQLlQEKAERTKKRLKQLM 229 689**************************************8862566888888777775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50052 | 8.888 | 27 | 230 | IPR008144 | Guanylate kinase-like domain |
Gene3D | G3DSA:1.20.5.170 | 2.9E-13 | 166 | 231 | No hit | No description |
SMART | SM00338 | 5.9E-10 | 169 | 233 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-13 | 170 | 230 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.519 | 171 | 216 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.90E-16 | 173 | 219 | No hit | No description |
SuperFamily | SSF57959 | 4.08E-9 | 173 | 222 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 176 | 191 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence Send to blast |
MGKSSASSAA CFLRTETVRN GRGKLGSESV VVGGCSSVEK SGLDPDRLQR NPSAVVNPEI 60 RAIDSAGVVV PLADTSICRK SVDDVWREIM AGKKAEQEPK EEMMTLEEFL LQAGVMGDTD 120 TASASTSTDL VGVKEESVVI HEDNSGVGVL HLQGMRGKRS SISLDPLNKA SLQRQKRMIK 180 NRESAARSRE RKQAYQVELE SMVMKLEEEN LQLLQEKAER TKKRLKQLME NVIPLTEKQT 240 SSRLQRFHST EW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678441948 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012829604.1 | 3e-58 | PREDICTED: G-box-binding factor 4-like | ||||
Refseq | XP_022874484.1 | 4e-58 | G-box-binding factor 4-like isoform X2 | ||||
Swissprot | P42777 | 2e-41 | GBF4_ARATH; G-box-binding factor 4 | ||||
TrEMBL | A0A2G9I064 | 1e-62 | A0A2G9I064_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2771 | 24 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 1e-33 | bZIP family protein |