PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678431384
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 283aa    MW: 31466.2 Da    PI: 5.661
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678431384genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.8e-11154201552
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                kr +r   NR +A+rsR RK+ +i eLe+ v++L++e +aL  ++  l
  678431384 154 KRIKRILANRQSAQRSRVRKLHYISELERSVATLQSEVSALSLRVAFL 201
                899**********************************99998766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.5E-15150214IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.599152215IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-12154206No hitNo description
SuperFamilySSF579595.87E-11154208No hitNo description
PfamPF001706.8E-10154201IPR004827Basic-leucine zipper domain
CDDcd147037.16E-21155205No hitNo description
PROSITE patternPS000360157172IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MGESPGGAPI AVRQNFWPSL PLQMLPEPTL LHSASWVDEF LDFSALRRSA HRRTVSDPIA  60
FVEVPENDGG FEKLDDEQLR NMFAEDVGLP NASSTSDTSS PSHQHSENDG NKGAPESRLV  120
KPKNERVERE CSPDIPPGVK SSENASSETI VDPKRIKRIL ANRQSAQRSR VRKLHYISEL  180
ERSVATLQSE VSALSLRVAF LDHQRLLLNM DNSALKQRIA ALAQDKIFKD AHQEALRKET  240
ERLRRIYEDQ NMSKDKEMHG GDVDAGGAVL AAEFDGNCAC TVE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678431384
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082729.11e-104basic leucine zipper 61
SwissprotQ9M2K41e-76BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2G9HTN51e-106A0A2G9HTN5_9LAMI; Uncharacterized protein
STRINGXP_010279202.11e-88(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17752465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-75bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]