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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678420640 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | G2-like | ||||||||
Protein Properties | Length: 204aa MW: 23229.6 Da PI: 8.0497 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102 | 3.9e-32 | 105 | 160 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W++eLH+rF++a++qLGG++ AtPk+i+elm+v+gLt+++vkSHLQkYRl+ 678420640 105 KQRRCWSSELHRRFINALQQLGGAHAATPKHIRELMQVDGLTNDEVKSHLQKYRLH 160 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.6E-17 | 102 | 163 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 13.384 | 102 | 162 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.6E-28 | 103 | 163 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.2E-27 | 105 | 160 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.3E-7 | 107 | 158 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
MPRKHNNETR PAVRKQLRRC EDDGVCDWDK MKWMSSVQLW NSGNPGTKDQ GKKRLPFSTN 60 ERSEDKAPLL SLAVSETKNE NSSPKSSSGT SPPADSKLNS KTARKQRRCW SSELHRRFIN 120 ALQQLGGAHA ATPKHIRELM QVDGLTNDEV KSHLQKYRLH TRRASALHVN PSFLHCSTPS 180 NHTGEQEEDE EEEDDDDTSE IHNH |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678420640 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017426139.1 | 1e-38 | PREDICTED: myb family transcription factor EFM-like | ||||
Swissprot | Q9FPE8 | 3e-35 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A4D8XWZ0 | 9e-39 | A0A4D8XWZ0_SALSN; Uncharacterized protein | ||||
STRING | Migut.N01205.1.p | 1e-37 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4361 | 24 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 1e-35 | G2-like family protein |
Publications ? help Back to Top | |||
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