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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
678417385 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family |
GRAS |
Protein Properties |
Length: 538aa MW: 59457.9 Da PI: 5.8512 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
678417385 | genome | UGSP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 397.1 | 1.8e-121 | 157 | 538 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdle........laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
l++lL++cAe+v++ d+ +a+al++ l++++s +gdp++Rl ay++e+ +arl++s+s++yk l+++e + +sse ++++++ +e++P++k
678417385 157 LKKLLITCAEVVAEADTIsdrqvalsAAEALIEILEKRVSVSGDPLERLGAYMLEGVRARLLHSGSTIYKRLKCKEPINPTSSELMSYMHVIYEICPYYK 256
5789********9966432333555599**************************************************999******************* PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
f+++ I e +e+e+r+HiiDf+i qG QW++++q+ + Rp+gpp lRiTgv++p+s + l+ +g La++A+++gvpfef+ +a + ++++
678417385 257 FAYVSSSVIISETMENESRIHIIDFQIAQGSQWVSFIQSVSRRPAGPPYLRITGVDDPQSAhaRGGGLQLVGLTLANVARSCGVPFEFHG-AAISGSEVQ 355
***********************************************************99889999***********************.8999***** PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
e+L v++gEa+aVn+ ++lh+++de+vs+e++rd++L+lv+slsPkvv+++eqe+++n++ Fl+rf e+l+yy+a+f+s++a re+++ri+ E++++
678417385 356 WENLGVQHGEAVAVNFPYALHHIPDENVSIENHRDRLLRLVRSLSPKVVTLIEQESNTNATGFLQRFQESLNYYVAMFESIDAACQREDKKRISTEEHCV 455
**************************************************************************************************** PP
GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+r++vn++aceg +r+erhe ++kWr+r+ +aGF+pv+ls + k + +l++++s+ y+v e +g+l+lgWk+r++ ++SaWr
678417385 456 ARDVVNIIACEGPDRVERHEPFGKWRRRFAKAGFSPVRLSPAVGKAVCNMLKEYSSN-YTVGEGNGALYLGWKNRAMSTCSAWR 538
*******************************************************77.*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 538 aa
Download sequence Send
to blast |
MDAPQDSEMS SSFHSSCSQP TPSQVQPYVF SGSRTGASSG QSLGGEFYTL ESTPDFVAYN 60 PSAASIRSPF SPQDSHYSLA SDHQHSPDLT VYDSAIPGSS GVEDENKLMH ALWVLRNELL 120 GPESDTDDIG CFGPQVIQPS PFSRYDRILE KAPNMDLKKL LITCAEVVAE ADTISDRQVA 180 LSAAEALIEI LEKRVSVSGD PLERLGAYML EGVRARLLHS GSTIYKRLKC KEPINPTSSE 240 LMSYMHVIYE ICPYYKFAYV SSSVIISETM ENESRIHIID FQIAQGSQWV SFIQSVSRRP 300 AGPPYLRITG VDDPQSAHAR GGGLQLVGLT LANVARSCGV PFEFHGAAIS GSEVQWENLG 360 VQHGEAVAVN FPYALHHIPD ENVSIENHRD RLLRLVRSLS PKVVTLIEQE SNTNATGFLQ 420 RFQESLNYYV AMFESIDAAC QREDKKRIST EEHCVARDVV NIIACEGPDR VERHEPFGKW 480 RRRFAKAGFS PVRLSPAVGK AVCNMLKEYS SNYTVGEGNG ALYLGWKNRA MSTCSAWR
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |