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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
678410015 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
|
Family |
MYB |
Protein Properties |
Length: 471aa MW: 52085.7 Da PI: 4.6348 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
678410015 | genome | UGSP | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 60.3 | 4e-19 | 39 | 86 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+ Ede+lvd+v+++G g+W+++ ++ g+ R++k+c++rw ++l
678410015 39 KGPWTPREDEILVDYVNKHGEGNWNAVQKHTGLSRCGKSCRLRWANHL 86
79******************************************9986 PP
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2 | Myb_DNA-binding | 48.7 | 1.7e-15 | 92 | 135 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+g++++eE+ l++++++++G++ W++ a++++ gRt++++k++w++
678410015 92 KGPFSEEEERLILELHAKMGNK-WARMAAELP-GRTDNEIKNFWNT 135
79********************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MCLNRKGDEA MLPHESIDSP SADDDDSGVN GGSNSPVKKG PWTPREDEIL VDYVNKHGEG 60 NWNAVQKHTG LSRCGKSCRL RWANHLRPDL KKGPFSEEEE RLILELHAKM GNKWARMAAE 120 LPGRTDNEIK NFWNTRIKRR QRAGLRIYPE DVCAEFRNEN QGDEIDSHST GQEYPSEVAA 180 FEGFEIPTVE FHSLSQPLYS SKLISSIKIP EIPARLIFGQ GRQPCYGDRS VCSTLHLSKP 240 PPVPELLYSN HNNPTFGSFT GVNNLTGDGC LEIGQPLGFS SFYDHDSVSD QAISPNLFPD 300 DHTMLTDTSE LPSLQNQVGG WGIPTPSFPM PVFHDTSIQT TQVENTCMFP PPNSGLLDDV 360 IHELEANFNT NTFLSPGTSY DPTLVAHMVN DSNQNAHENV CGYDMVSPVG LSSPSALYDS 420 SPFSINSFEE PKDANVFQVI TPPLLSPNGI FQEETRDAGS NANSTMTRSA W
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1a5j_A | 5e-33 | 39 | 140 | 7 | 107 | B-MYB |