PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678405046
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 279aa    MW: 30448.9 Da    PI: 8.7255
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678405046genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.56.2e-3841100261
     zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lr+vPvGgg rknk+ 
  678405046  41 QSAALKCPRCDSVNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRDVPVGGGFRKNKRG 100
                56789****************************************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027012.9E-334499IPR003851Zinc finger, Dof-type
ProDomPD0074781.0E-254499IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.1524599IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104783IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MPLQDIAQQA AGVGRGVGDG DGGRFFGRDR RTRPPQSHVQ QSAALKCPRC DSVNTKFCYY  60
NNYNLSQPRH FCKSCRRYWT KGGVLRDVPV GGGFRKNKRG SHKSGDMKGR IISKAHTRSF  120
AVLPSEPPAV KTATESATYT SPVSSDAVSY NNNDTNNNRN TCYSDSQFFS FNAHPPLVAP  180
STAERHIPQP VITGSENLIP PPIAAGLESQ AASFCADAFG RRELKGGMNQ DVCRVTTEWM  240
SGGGVEEEGA LIDLTAATAY WSHHQWTYSS DPPSLDFLP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678405046
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.16e-34DOF zinc finger protein 1