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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
678402298 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family |
GRF |
Protein Properties |
Length: 505aa MW: 53835.9 Da PI: 7.6856 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
678402298 | genome | UGSP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 76.6 | 2.5e-24 | 184 | 228 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45
d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e
678402298 184 DPEPGRCRRTDGKKWRCSRDAVTDQKYCERHMNRGRHRSRKPVEG 228
79****************************************985 PP
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2 | QLQ | 54.5 | 3.5e-19 | 106 | 141 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
+FT++Q+++L++Q+l+yKy+ +n+P+P+ Ll +++k
678402298 106 PFTPSQWMELEHQALIYKYITSNVPIPSCLLNPVRK 141
8******************************99986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 505 aa
Download sequence Send
to blast |
MDLGALDLDS LVCCSSSVTL PSNNGGFSFE IDRQKGFGSG FLKQERGVNE RTHCSNLSEG 60 QQQMLSFSLP ASSQAAALPY FHQTSSGFNR GTGLNSVGAF PGMRIPFTPS QWMELEHQAL 120 IYKYITSNVP IPSCLLNPVR KPLESAGFST FSGLRSNPSD LDAIPGLFIV GWGAFHLGGF 180 SSSDPEPGRC RRTDGKKWRC SRDAVTDQKY CERHMNRGRH RSRKPVEGQS AHAGARTTAV 240 NKKPAPVSVT PTAAGPASNS LSISQQHQLS GLHQQPGSDI LAFSSFDRSF LDKENNSCSM 300 PKQQTSFQDF GLLCSNSLLN QLDRSSNLGH GSSIGGSDRL NDKDNKSGSN PLRQFMDAWS 360 ESHSDRPSPS SPSSKLQSSS QELEMCLAVG TAAAQHSQRQ STNWVPISWE PSMAGPLGEV 420 LHSTACAAGD SLDAKPLNLM ESLDNSSHLA LSPTGVLSRC TFGSLSNSSA GSSPRAESSK 480 ALDGGGVTLC NGIIPGMLST SMPNL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 6e-33 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |