 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
678398594 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
|
| Family |
WRKY |
| Protein Properties |
Length: 302aa MW: 33243.3 Da PI: 6.6177 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 678398594 | genome | UGSP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 102.1 | 3.2e-32 | 151 | 209 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s+fprsY+rCts++C vkk+vers d++vv++tYeg H+h+
678398594 151 LDDGYRWRKYGQKGVKNSPFPRSYFRCTSTSCGVKKRVERSPGDGSVVITTYEGVHTHP 209
59********************************************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MGSGFMLEDA PPPQRAAFLE SDSDQSLMMS FCGITCGEDE EEWGRGELES CLGFGSTCGF 60
DELLLQDVVS LPGEQNFPAA ERSEVVTTPN SSNSTALSTN EGDGDRKLNS PSPLNHDRSH 120
KKHLLGAKKK SIKRKREPRF AFMTKSETDH LDDGYRWRKY GQKGVKNSPF PRSYFRCTST 180
SCGVKKRVER SPGDGSVVIT TYEGVHTHPC PITPRLSFGL VPETAASGCG GAARQGVYSQ 240
PQSIAVPEKL QQTHYLPSFG NTFCETPFGA AMASLELQRD RGLLQDMLRL PSSEMFRDPK 300
ME
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1wj2_A | 9e-25 | 141 | 211 | 7 | 77 | Probable WRKY transcription factor 4 |
| 2lex_A | 9e-25 | 141 | 211 | 7 | 77 | Probable WRKY transcription factor 4 |
