PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678381455
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 271aa    MW: 29881.9 Da    PI: 5.4341
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678381455genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.4e-0987133455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ E rRR+r+++ +  Lr+l+P+      +K++Ka+i+  A+ Y+++Lq
  678381455  87 RSSATECRRRSRMRDDLYVLRSLVPNI-----TKMDKASIVGDAILYLQELQ 133
                5578899*******************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.03E-1383152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.36783132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-1385147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.61E-1085135No hitNo description
PfamPF000101.3E-687133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-789138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MKEAAGFENG TTDDDPFWDL DFTPEDSFEC VDDVLTAGDC FLSPAALSGT GSSPQDEGGA  60
IDELLPTRAS KTTKKKKKVC ERTHRSRSSA TECRRRSRMR DDLYVLRSLV PNITKMDKAS  120
IVGDAILYLQ ELQMQANDLR VEISTLEACN VFPPSLGRLA KNYSPSLHPI NSKIYQIDVV  180
PISKTEYYAR ILSSRGKCVA AFLHKALHSL TSISIQASQL AASQDKYSFT LTFTVIGTTV  240
QVNEGEVEGG PRYLKLWLGS ALVLEGFEVE L
Cis-element ? help Back to Top
SourceLink
PlantRegMap678381455
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37822340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.13e-36FER-like regulator of iron uptake