 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
678378354 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
|
| Family |
WRKY |
| Protein Properties |
Length: 500aa MW: 54875.4 Da PI: 8.2405 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 678378354 | genome | UGSP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 102.5 | 2.4e-32 | 219 | 276 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
++DgynWrKYGqK+vk se+prsYY+Ct+++Cpv+kkvers d+++ eitY+g+Hnh+
678378354 219 VNDGYNWRKYGQKQVKASECPRSYYKCTHPDCPVRKKVERSI-DGRISEITYKGQHNHD 276
58****************************************.***************7 PP
|
| 2 | WRKY | 105.4 | 3e-33 | 389 | 447 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYYrCt+agC+v+k+ver+++dpk v++tYeg+H+h+
678378354 389 LDDGYRWRKYGQKVVKGNPYPRSYYRCTYAGCKVRKHVERASTDPKSVITTYEGKHTHD 447
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:1900150 | Biological Process | regulation of defense response to fungus |
| GO:1900425 | Biological Process | negative regulation of defense response to bacterium |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 500 aa
Download sequence Send
to blast |
MGHQEDDASS ASAASKPKPK IHLPPRASME MFFANGSFSP GPMTLVSSLF PDQTHFSFSQ 60
LLVGAMASPL AAPKPPPFAG GFSQDDFDKD KERGLQRNRP PSLVVAPPRQ LPENLSPLLL 120
GMSPSGLLNS PVLLSPLQSP FGMSHQQALA HVTAQAALSQ SFKQMQSEVQ QQELPSSVEA 180
SEANPTNTPL ENLASFPQEQ SLVSSSDHKT ASSVGDKPVN DGYNWRKYGQ KQVKASECPR 240
SYYKCTHPDC PVRKKVERSI DGRISEITYK GQHNHDLPQP SKRVREHGSM DGTGVSQQRP 300
ILPSQEHTEG NRLQGVVSFP SEGSSFQETV QEPFEYGTMP SDFQNNAASV EKEEDMPSAK 360
RRSTEIGQAH QTVMESKIVL KTRSEVDLLD DGYRWRKYGQ KVVKGNPYPR SYYRCTYAGC 420
KVRKHVERAS TDPKSVITTY EGKHTHDLPL GRSGSHPHPT ASTSSQPFKT MPGSGASQSH 480
PVIPEQKPDT LHLKGDEVIA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds specifically to the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Has a positive role in resistance to necrotrophic pathogens (e.g. Botrytis cinerea), but a negative effect on plant resistance to biotrophic pathogens (e.g. Pseudomonas syringae). {ECO:0000269|PubMed:18570649, ECO:0000269|PubMed:22219184}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By biotic and abiotic stresses such as pathogen infection (e.g. Botrytis cinerea and Pseudomonas syringae), salicylic acid (SA), jasmonic acid (JA), ethylene (ACC), liquid infiltration or spraying, and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:18570649}. |
