PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678374300 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | Dof | ||||||||
Protein Properties | Length: 252aa MW: 27331.7 Da PI: 8.204 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 128.4 | 2.1e-40 | 70 | 129 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++alkcprCds+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk++s 678374300 70 QEALKCPRCDSANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRAS 129 7899*****************************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 8.0E-26 | 60 | 122 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.6E-34 | 71 | 127 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.534 | 73 | 127 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 75 | 111 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence Send to blast |
MGMMMDCSSS QQVGWLSFSS FPPNMAFSSC LTMCPDFLLL QETLESILAS SSGSAAVAEQ 60 QGKKPRPADQ EALKCPRCDS ANTKFCYYNN YSLSQPRYFC KSCRRYWTKG GTLRNVPVGG 120 GCRKNKRASA SRSSSKRAAV ARQDPTPTAG FPKQQQHASS SQGRDFGIWG SPNPELWFPD 180 SVGIADAHHQ DHPMFYEQMG IPFGGYLATT AVKQETCQES GEGSRALWGF PFGGDAGADV 240 GIGGCSTWHG LM |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678374300 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022875090.1 | 5e-49 | dof zinc finger protein DOF2.1-like | ||||
TrEMBL | S8E3T4 | 4e-47 | S8E3T4_9LAMI; Uncharacterized protein | ||||
STRING | XP_004505949.1 | 2e-47 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 6e-33 | TARGET OF MONOPTEROS 6 |