PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678372079

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Dof

Protein Properties

Length: 177aa MW: 19377.6 Da PI: 8.275

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678372079	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.4	6.3e-38	17	73	4	60
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +a +cprC s+ntkfCy+nnyslsqPryfCk+CrryWtkGGalrnvPvGgg+rk ++ 678372079 17 SAPHCPRCASSNTKFCYFNNYSLSQPRYFCKSCRRYWTKGGALRNVPVGGGCRKTRR 73 5678**************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-24	10	73	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.2E-32	18	73	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.556	19	73	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	21	57	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence Send to blast
MASFGGAGNR KRVDVESAPH CPRCASSNTK FCYFNNYSLS QPRYFCKSCR RYWTKGGALR 60 NVPVGGGCRK TRRPAKKDVL PPPVDNDPAD RGGGFAVPPV SIPMTSCGID GGKGDAWGSK 120 INGGDDLIHN QVALRGETPR QSNSLDFGYP ESAAQIQDYE LVWHDDDQPL FSSTWEF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678372079

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019266430.1	4e-35	PREDICTED: dof zinc finger protein DOF3.2-like
TrEMBL	A0A314L0R9	1e-33	A0A314L0R9_NICAT; Dof zinc finger protein dof3.5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	2e-34	Dof family protein