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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678370354 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | Dof | ||||||||
Protein Properties | Length: 248aa MW: 26850.1 Da PI: 9.5859 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.2 | 2e-39 | 15 | 75 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ke+ ++cprC stntkfCyynnyslsqPr+fCk+CrryWt+GG+lrn+PvGgg+rknkk s 678370354 15 KEQGVNCPRCSSTNTKFCYYNNYSLSQPRHFCKTCRRYWTEGGSLRNIPVGGGSRKNKKPS 75 68999*****************************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 6.0E-29 | 8 | 73 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.2E-33 | 17 | 73 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.938 | 19 | 73 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 21 | 57 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence Send to blast |
MKSCSVEKKV SRPQKEQGVN CPRCSSTNTK FCYYNNYSLS QPRHFCKTCR RYWTEGGSLR 60 NIPVGGGSRK NKKPSSANTH HSTTSSSSSR KIPEFLAHQQ NPKPLEAQDL SLGFSAKNFH 120 VPSFGNASKL ELLHKDPPPP PPPQMIGSSP SHYSFVPLPF IACGDPAVVY SSGFPSLPEL 180 IKPTLNFSLD AGLGSNYGSF QGGPPTNMKE LVFPFEGVKQ GSSRGDQNGD QNADSIGIWN 240 GVLGGGSW |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678370354 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011070363.1 | 8e-76 | dof zinc finger protein DOF4.6 | ||||
TrEMBL | A0A4D8Z9L1 | 4e-68 | A0A4D8Z9L1_SALSN; Uncharacterized protein | ||||
STRING | EOY23946 | 2e-63 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.3 | 3e-39 | Dof family protein |