PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678365117
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 459aa    MW: 49015.2 Da    PI: 9.1997
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678365117genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.66.6e-14115165454
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                l+++rr++kNRe+A rsRqRK+a++ e e  v++Lea N +L ++  +l+ 
  678365117 115 LQKQRRMIKNRESAARSRQRKQAYTMEMEALVAQLEADNAKLLEQEAKLSR 165
                89*************************************999875554443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.7E-11112176IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.611114166IPR004827Basic-leucine zipper domain
PfamPF001702.1E-12114167IPR004827Basic-leucine zipper domain
CDDcd147072.67E-21116166No hitNo description
SuperFamilySSF579593.62E-9116165No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-12117166No hitNo description
PROSITE patternPS000360119134IPR004827Basic-leucine zipper domain
SuperFamilySSF511822.97E-44268457IPR011051RmlC-like cupin domain
Gene3DG3DSA:2.60.120.101.0E-61268458IPR014710RmlC-like jelly roll fold
SMARTSM008351.1E-35303451IPR006045Cupin 1
PfamPF001901.1E-46305450IPR006045Cupin 1
PROSITE patternPS007250346359IPR019780Germin, manganese binding site
PRINTSPR003254.7E-27351371IPR001929Germin
PRINTSPR003254.7E-27381401IPR001929Germin
PRINTSPR003254.7E-27414429IPR001929Germin
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0010497Biological Processplasmodesmata-mediated intercellular transport
GO:2000280Biological Processregulation of root development
GO:0005618Cellular Componentcell wall
GO:0005634Cellular Componentnucleus
GO:0009506Cellular Componentplasmodesma
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0030145Molecular Functionmanganese ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0045735Molecular Functionnutrient reservoir activity
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    Send to blast
MNIDDILRRA YYESQSPGDG MQDETRSKMN AMWGSGKSTM SLEDFLAEAG AVNKGGVGDS  60
PPPPDDFRVM DSSIPTPGSE IPGFQLAVAP SMQKGRGKTR GPPQMAEPPL EKFTLQKQRR  120
MIKNRESAAR SRQRKQAYTM EMEALVAQLE ADNAKLLEQE AKLSRKRYKQ ICPDGEPDSS  180
DGAAATTESS SSQSAFLAMV KAKAKANGVG ACLKLTSQLQ TRIRCLPFSL FSLSPLSLGI  240
VVPMAVPISV AVAIAAVFLI LCGGASADPE ALQDICVADL NSTVKVNGFP CKANATAEDF  300
FSDRLKLPGA TNNSFGSLVT AANVQSIPGL NTLGVSLSRI DYAPGGLNPP HTHPRATEIV  360
FVLEGELDVG FITTANRLIS KTIRKGEIFV FPKGLVHFQV NNRRFNAAVI AAFNSQLPGT  420
QSIATTLFGP ASAVPSTVLA KAFHIATPEV EKIKSRFAP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2et7_A7e-542674581198Oxalate oxidase 1
2ete_A9e-542674581198Oxalate oxidase 1
2ete_B9e-542674581198Oxalate oxidase 1
Cis-element ? help Back to Top
SourceLink
PlantRegMap678365117
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-17bZIP family protein