PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678365083
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 402aa    MW: 43345.1 Da    PI: 6.5195
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678365083genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.3e-30194253159
                ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                ++Dg++WrKYGqK  kg+++pr+YYrCt a gCp++k+v+r++ed +++++tYeg+Hnh+
  678365083 194 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaGCPARKQVQRCQEDMSILITTYEGTHNHP 253
                58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.2E-33179255IPR003657WRKY domain
SuperFamilySSF1182906.93E-28187255IPR003657WRKY domain
PROSITE profilePS5081129.585189255IPR003657WRKY domain
SMARTSM007742.1E-37194254IPR003657WRKY domain
PfamPF031061.0E-27195253IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MEIDLSLKLV PAQEPPDKRI ESGQNGDDQL EGSSKNDQEC SDQSFKEEEE LWNLQKKMKQ  60
MKEENQFLRT AIEKSLKDYT DLRAKCSGFH QNNEQESGMA LMTHGESSGG KASSETRNEG  120
GGGGETADLL GLVRADNGEE TTQRNKSDMS IGLSQIQGEA ERNNMLSGIM SNISTSANRR  180
ARVSVRARCE SATMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAAGCPARK QVQRCQEDMS  240
ILITTYEGTH NHPLPVTATA IASTASAAAA ASFKQLDSGS TFPIPYNTLQ SSYLNQLNFP  300
NPNIINSMGS SSSVPPMGFS FMPKQQGLFN SSAMEGSEGS ALGQRCNFNM VANVNSLTTN  360
PAFRVAVAAA ISSLINKESQ TSSAPDGASS KEKKDPGSKP GT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-21181255174WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678365083
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092693.28e-83probable WRKY transcription factor 9
SwissprotQ9C9F07e-63WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A2Z7ALZ96e-96A0A2Z7ALZ9_9LAMI; WRKY DNA-binding protein 9 isoform 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72872129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.13e-41WRKY DNA-binding protein 9