PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

678365027

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

G2-like

Protein Properties

Length: 258aa MW: 29222.5 Da PI: 9.5098

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678365027	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	46	1.2e-14	144	173	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk+il+lm+ gLt+ h+kSHLQkYR 678365027 144 EATPKQILKLMDAGGLTIFHIKSHLQKYRN 173 69***************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.0E-12	143	174	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.5E-10	144	174	IPR006447	Myb domain, plants
SuperFamily	SSF46689	1.38E-5	145	173	IPR009057	Homeodomain-like
Pfam	PF14379	7.8E-19	206	250	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence Send to blast
MQHSRSFGSA LMAQELESRL LPPKLTGNEL EERDACVSSH RGLLSHMNSG AVFRNGVEDL 60 YGRPYPVLEP WTSHGFHGRH VIRLNMPPSY CSKIPPICET GLLKLKLLDH SKTPDHPAVT 120 FCFRDSQLLL PRVSQTDLLL VCIEATPKQI LKLMDAGGLT IFHIKSHLQK YRNAKSVPSS 180 SQGKRRETGT GSSSNISTQN DNHKLQIKEA LQLQLDVQRR LHEQLEIQRN LQLRIEEQAK 240 QLKLMFDIQR NAADTHQS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678365027

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022640589.1	2e-37	myb family transcription factor PHL5 isoform X4

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2491	24	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	9e-36	G2-like family protein