PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678359338
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 633aa    MW: 71495 Da    PI: 7.5659
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678359338genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.4e-13445492355
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                r+h   Er+RR++iN++f  L +++P+      +K +K++iL +++eY+++L+
  678359338 445 RNHVLSERKRREKINERFLILGSIIPSG-----GKFDKVSILDHTIEYLRELE 492
                579999********************98.....8****************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142154.3E-4513235IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088815.993442491IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-10445492IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.19E-13445496No hitNo description
SuperFamilySSF474592.62E-17445509IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-16446506IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.1E-15448497IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    Send to blast
MELEDQKEVL QNLRKHLALA VRSIQWSYAI FWSISSLDHG NGKQDNRRIR GGWKRRSNMG  60
FEGKSAYLVF LRVPSFLVFV RLEWYDGYYN GEIKTRKTVQ SAEWNPDQLG LRRTEQLREL  120
YESLSIGETS NQAKRPTAAL IPEDLSNAEW FFLVCMSFNF NIGQGLPGMA MDKNEAIWLC  180
NAHSADTRFF SRSLLAKSAA IKTIVCFPHL GGVVELGTSQ PVREDMNLIR HVKMVLLKNP  240
NIDHEGVFNN DHETGCPVDC PTDKHSPNNC SDDFSDHLLR ETSNLVDGVG GETPSQMLNL  300
QFLDDAISNC LNNSVSSSDC ASQTYEDPRP IALPKGARNG TLECYRNHPH DTKEMDAHYH  360
GVLSSLLKSS HQLILGPYFR NANPASSFVC WRRDGFVGDQ VHNSVAPQML LKKVLIEVPR  420
LHVNFRSEGV KQSSNSTQEV EETDRNHVLS ERKRREKINE RFLILGSIIP SGGKFDKVSI  480
LDHTIEYLRE LERKLKGLES YKEAMELERP LDAVERTSDN YGSNNIGHVK KPSTSKRNSN  540
DANETGGKSK RPKLRDPSPD DVTVQVLDKE VLIGSQCSWT ENMIVQLMGA LTREHLLCLQ  600
CKGLKAPSAS VIRQALDKVI SQEMKNLKVL KDC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5t0f_A4e-122623224188Transcription factor MYC3
5t0q_A4e-122623224188Transcription factor MYC3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1450455ERKRRE
2451456RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678359338
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080947.10.0transcription factor EGL1 isoform X1
TrEMBLN0DQT80.0N0DQT8_9LAMI; BHLH transcription factor
STRINGMigut.E01090.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45762435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41315.11e-129bHLH family protein