PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678358124

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

bHLH

Protein Properties

Length: 377aa MW: 41009.3 Da PI: 7.5891

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678358124	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.9e-12	306	351	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el P+ +k s a++L +AveYIk+Lq 678358124 306 SIAERMRRTRISEKMKKLQELFPNM----DKQTSTADMLDLAVEYIKDLQ 351 689*******************7....688***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	14.583	300	350	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.83E-15	303	361	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.74E-12	304	355	No hit	No description
Gene3D	G3DSA:4.10.280.10	6.5E-14	305	361	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.8E-9	306	351	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.8E-13	306	356	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence Send to blast
MFKSGTLAGE MTSNTSSNDV HKHNSRGVEV DFYQESAPLP RYRSAPRSFL AALMDSPADN 60 SSSGDESEAL FSAIWSGPLD LNHKGGDDSC QMQFGMQDTG AESEIRSGFS SGLTVYTGAG 120 SGGGGAGSGT ERQVQLRSNC GNGSNPNLLR QNSSPAGFFS GCGLIGDVGN YGAHRANSSA 180 TDVSSSQLNF SGPSLSPRII PNIPDNRGSK SEHSRNVEAP FSHDSWTECL KRNHDGNLKM 240 FSTFNEVHNQ TAETGRNSPK LIHHLSLPTT STEKGESDRI RFLQFHPDAA PCQMRAKRGC 300 ATHPRSIAER MRRTRISEKM KKLQELFPNM DKQTSTADML DLAVEYIKDL QHQLQTLTDA 360 KAKCICMSKQ RVPNNDN

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence Send to blast

MFKSGTLAGE MTSNTSSNDV HKHNSRGVEV DFYQESAPLP RYRSAPRSFL AALMDSPADN  60
SSSGDESEAL FSAIWSGPLD LNHKGGDDSC QMQFGMQDTG AESEIRSGFS SGLTVYTGAG  120
SGGGGAGSGT ERQVQLRSNC GNGSNPNLLR QNSSPAGFFS GCGLIGDVGN YGAHRANSSA  180
TDVSSSQLNF SGPSLSPRII PNIPDNRGSK SEHSRNVEAP FSHDSWTECL KRNHDGNLKM  240
FSTFNEVHNQ TAETGRNSPK LIHHLSLPTT STEKGESDRI RFLQFHPDAA PCQMRAKRGC  300
ATHPRSIAER MRRTRISEKM KKLQELFPNM DKQTSTADML DLAVEYIKDL QHQLQTLTDA  360
KAKCICMSKQ RVPNNDN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678358124

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087339.1	1e-120	transcription factor bHLH130
TrEMBL	A0A2G9FZD6	1e-113	A0A2G9FZD6_9LAMI; Uncharacterized protein
STRING	Migut.B01333.1.p	1e-93	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4435	22	38

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	5e-50	bHLH family protein