PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678357940

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Dof

Protein Properties

Length: 454aa MW: 49091.1 Da PI: 7.2987

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678357940	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1.1e-38	194	254	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+alkcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG++rn+PvGgg+rkn k+ 678357940 194 DEQALKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTIRNIPVGGGCRKNSKKA 254 5799*****************************************************8865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-27	192	252	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.6E-32	196	252	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.63	198	252	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	200	236	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence Send to blast
MDLKLCDDNS KQETEESIRY AQRRVANSLQ DPRHWARGTE GVSLVDYPVR MEKSFLGCTA 60 QIAISVARAS PLKRNGRTNQ FCVDLDFEVS EDGSLLVKGG SSQGPTCAVR CGFFYTKQPA 120 TAAQNPCHQI LLTVDPSSVV FLCTVASLIS PSGMMTRAGV DSSSTPMGGS ASSENVVFGG 180 ERSSVERRLG RPQDEQALKC PRCESTHTKF CYYNNYSLSQ PRYFCKTCRR YWTKGGTIRN 240 IPVGGGCRKN SKKASTVAAA SRKLSTDFQS SSVSPSLMLK PESNSFSSFP FTIFSTDDSN 300 PANLHLTFPE QLQFSSPLNA AAFTPAPEFL IGNPLRFDIM EANNEPFMAT GDKYPVPASF 360 NDDGCGSCLS LDHNGGDVLE RFLMLPYGGG DGTAVDVKPD AKILLPHENH NHVHGAACCC 420 CSNSNTAKDT FGYNLGSWAG FMGGYGCSAT NPLV

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence Send to blast

MDLKLCDDNS KQETEESIRY AQRRVANSLQ DPRHWARGTE GVSLVDYPVR MEKSFLGCTA  60
QIAISVARAS PLKRNGRTNQ FCVDLDFEVS EDGSLLVKGG SSQGPTCAVR CGFFYTKQPA  120
TAAQNPCHQI LLTVDPSSVV FLCTVASLIS PSGMMTRAGV DSSSTPMGGS ASSENVVFGG  180
ERSSVERRLG RPQDEQALKC PRCESTHTKF CYYNNYSLSQ PRYFCKTCRR YWTKGGTIRN  240
IPVGGGCRKN SKKASTVAAA SRKLSTDFQS SSVSPSLMLK PESNSFSSFP FTIFSTDDSN  300
PANLHLTFPE QLQFSSPLNA AAFTPAPEFL IGNPLRFDIM EANNEPFMAT GDKYPVPASF  360
NDDGCGSCLS LDHNGGDVLE RFLMLPYGGG DGTAVDVKPD AKILLPHENH NHVHGAACCC  420
CSNSNTAKDT FGYNLGSWAG FMGGYGCSAT NPLV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678357940

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G9HDC8	3e-59	A0A2G9HDC8_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4895	22	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-34	TARGET OF MONOPTEROS 6