PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678346517
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 286aa    MW: 32170 Da    PI: 9.7226
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678346517genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.5e-1266114155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                rr++h ++Er+RR+++N+ ++ Lr+l+P++   +    + a+i+  A+e++k+L+
  678346517  66 RRMTHIAVERNRRKQMNEHLAVLRSLMPES---Y---GDQASIVGGAIEFVKELE 114
                8****************************7...3...678999999999999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.95E-1264118No hitNo description
SuperFamilySSF474593.14E-1464124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-1364116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.40165113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-966114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-871119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MALEALSSAE ILNYFIYDST FAPVPGFDDT QVPAPPPPSS EPGLLPRKKR RRRPKICKNK  60
EEAETRRMTH IAVERNRRKQ MNEHLAVLRS LMPESYGDQA SIVGGAIEFV KELEHILQTL  120
QAKNVTAGVG VSGRGEENPF SQFFLSPQTS QLGHKCVSQT KAAVADIEVT LIETHANIRI  180
LCRRCHLSRL VLSFRAALLS ILHLNVSSFE PLILYTISAK VLLLSASKSS CIYSTQHRFP  240
ANEKRNSHNA RKDNKTRPLE NDTTMQKNPL CLLSPLYIYH KEHFGD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14553PRKKRRRRP
24652RKKRRRR
34752KKRRRR
46677RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678346517
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023923169.12e-77transcription factor bHLH71-like
SwissprotQ9SK914e-48BH094_ARATH; Transcription factor bHLH94
TrEMBLA0A2G9GIK05e-78A0A2G9GIK0_9LAMI; Uncharacterized protein
STRINGMigut.O00536.1.p2e-72(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA56322436
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.14e-49bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]