PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678336702 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | B3 | ||||||||
Protein Properties | Length: 103aa MW: 12061.9 Da PI: 9.304 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.6 | 9.1e-13 | 21 | 79 | 42 | 99 |
TS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE-S CS B3 42 sgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfrk 99 ++++W++ + r++ ++ + ++GW++Fv +n+L+ gD +vF+l+ + + e++v+++r+ 678336702 21 KNKTWDLFY--RGHYSTpRFEGSGWRSFVADNRLRIGDACVFELMtCNeTLLEFKVQILRH 79 679999999..77666656788*********************886666777888888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50863 | 11.378 | 1 | 80 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.6E-11 | 18 | 79 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.35E-11 | 19 | 79 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 1.9E-9 | 21 | 78 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.87E-11 | 23 | 78 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 103 aa Download sequence Send to blast |
MPKKMRWRLP RAPMRSVIRC KNKTWDLFYR GHYSTPRFEG SGWRSFVADN RLRIGDACVF 60 ELMTCNETLL EFKVQILRHD LPPELAAYLS NTGESEENPI GIT |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678336702 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1819 | 21 | 54 |