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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678334805 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | bHLH | ||||||||
Protein Properties | Length: 244aa MW: 27705.8 Da PI: 4.4809 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.8 | 4e-13 | 67 | 110 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR+++N+++ Lr+++P+ +K++Ka+i + A+ YI+sLq 678334805 67 VSERNRRKKLNERLYALRSVVPNI-----TKMDKASIIKDAISYIQSLQ 110 57*********************7.....7******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 16.469 | 60 | 109 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.16E-13 | 63 | 114 | No hit | No description |
SuperFamily | SSF47459 | 1.57E-17 | 64 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.7E-15 | 66 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.8E-17 | 66 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.1E-10 | 67 | 110 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MDSNEDVYNT YWENNMFHEY EEFDSYFDDP LSGCNDSSLE EQHCSYNYED TSSPDGAQSL 60 LESKNIVSER NRRKKLNERL YALRSVVPNI TKMDKASIIK DAISYIQSLQ VEEKRIQDEI 120 KELESGRHHS NGITVHREGA SFSSNKNTAR SPFPPIELLE LRVTSMGQGT IIVSMTCSEG 180 RETIVQLCEI FESLKLRVIT DSIIASSGKL IKTVFIEGDE EETENIRMKI EAAVAAANDG 240 KRDE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678334805 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011094111.1 | 1e-86 | transcription factor bHLH35 isoform X1 | ||||
Refseq | XP_011094112.1 | 1e-86 | transcription factor bHLH35 isoform X1 | ||||
Swissprot | Q2HIV9 | 1e-65 | BH035_ARATH; Transcription factor bHLH35 | ||||
TrEMBL | A0A2G9GQW6 | 1e-91 | A0A2G9GQW6_9LAMI; Uncharacterized protein | ||||
STRING | XP_009603227.1 | 5e-80 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2923 | 24 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 3e-68 | bHLH family protein |