PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678331988
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 194aa    MW: 20826.2 Da    PI: 7.5958
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678331988genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof115.62e-362175761
     zf-Dof  7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                cprCdst+tkfCyynny+ sqPryfCk+CrryWt GGalrnvPvGgg+rk++k+
  678331988 21 CCPRCDSTDTKFCYYNNYNHSQPRYFCKSCRRYWTLGGALRNVPVGGGTRKSNKT 75
               6**************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088428.1742074IPR003851Zinc finger, Dof-type
PfamPF027017.3E-312174IPR003851Zinc finger, Dof-type
ProDomPD0074787.0E-222274IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102258IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MKVPAPARPK CSKPKPGHRP CCPRCDSTDT KFCYYNNYNH SQPRYFCKSC RRYWTLGGAL  60
RNVPVGGGTR KSNKTPRPSV SDNSFNNPGS VLPSDATDGK LKVHEMGNSG SLSPACSNGG  120
GLLPFTLYGT ESDASFEQGL FSWPDEELCG GGSEYVAAPG EFPNCGTWEI GGDLVNLDLS  180
WPELAVPAPA DSNK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678331988
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G9HEV88e-38A0A2G9HEV8_9LAMI; Uncharacterized protein
STRINGXP_008445935.11e-28(Cucumis melo)
STRINGSolyc02g090220.2.11e-28(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.12e-31DOF zinc finger protein 1