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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678323495 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | bHLH | ||||||||
Protein Properties | Length: 193aa MW: 21800.2 Da PI: 12.1339 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.6 | 0.00013 | 142 | 173 | 19 | 55 |
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L +l+P + +K s + Le++++YI+ Lq 678323495 142 RINVLSRLIPGC-----RKASPLSLLEETTDYISALQ 173 688899999999.....8*****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.032 | 123 | 172 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.2E-7 | 141 | 181 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.22E-6 | 141 | 183 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MFMAEVDWGS GERFCLLRTW LGMAELLSTL DSRKIGIESS GTVSSLRRWE TVAEQRIYSS 60 KLIDALRRLR RGESKAISTQ RDVRDTADRV LALSARGRTR WSRAILNRRR RRSFGRTHKK 120 AGRPTAAVSR PNRPPCRPFQ RRINVLSRLI PGCRKASPLS LLEETTDYIS ALQMQVKAMT 180 SLAAATAQIN AAT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Atypical bHLH transcription factor probably unable to bind DNA. Negatively regulates brassinosteroid signaling. {ECO:0000269|PubMed:20023194}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678323495 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012858243.1 | 4e-42 | PREDICTED: transcription factor bHLH147-like | ||||
Swissprot | O80482 | 7e-31 | BH149_ARATH; Transcription factor bHLH149 | ||||
TrEMBL | A0A022RYK5 | 7e-42 | A0A022RYK5_ERYGU; Uncharacterized protein | ||||
STRING | Migut.B00942.1.p | 1e-42 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1431 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06590.2 | 2e-26 | bHLH family protein |
Publications ? help Back to Top | |||
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