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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678322171 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | WRKY | ||||||||
Protein Properties | Length: 359aa MW: 40137.9 Da PI: 7.7382 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.6 | 2.2e-32 | 199 | 255 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +Dgy+WrKYGqK vk+s+fprsYY+Ctsa+C+vkk+vers ed ++v++tYeg+H+h 678322171 199 EDGYRWRKYGQKAVKNSPFPRSYYKCTSASCKVKKRVERSCEDSSIVVTTYEGQHTH 255 8******************************************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.4E-33 | 183 | 256 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.23E-28 | 190 | 258 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.469 | 193 | 258 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.4E-37 | 198 | 257 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.1E-25 | 199 | 255 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence Send to blast |
MQLRGRQRCT TGWPHRARLR RHGPSVSTWG FTLTSTFSTS QRQRQKPDAC FGAIKPLSYS 60 VLDTRNRLLQ GSSPDSRFFL KELATHFHLY SSAAGEMELQ NLPTSPFFDF GFNEDQMSAS 120 LDLAEVLGDE FLPSGCDAAL IPETEEEVEM NSDSSLNSKE KAGNRRGSSL KVKAGKINKK 180 KERQPRVAFM TRTEIDHLED GYRWRKYGQK AVKNSPFPRS YYKCTSASCK VKKRVERSCE 240 DSSIVVTTYE GQHTHLCPPV TAVVAAAAVM AQPLQSSCFS SSPWEDELAS TQNQAPRSFT 300 APMNSGFTSL TTTTTTNSSS SEAHQVYSCD GSPDLFDGLL EDLVQTWPMQ DDLWLRNLH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 4e-26 | 186 | 259 | 2 | 75 | WRKY transcription factor 1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678322171 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1309 | 24 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 3e-44 | WRKY DNA-binding protein 23 |