PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678316030
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 390aa    MW: 42365.2 Da    PI: 9.2383
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678316030genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.7e-05153175223
                EETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                +C+ Cg++F+  ++L++H+ + H
  678316030 153 VCSQCGEVFPKIESLEHHQAVkH 175
                8******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280152175IPR007087Zinc finger, C2H2
PROSITE profilePS501578.808152180IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.90.228.103.2E-8177386IPR012317Poly(ADP-ribose) polymerase, catalytic domain
SuperFamilySSF563997.48E-20177386No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MAFVAPKKNK KPKKGPSSSS SATSSSSSWD QIKNILSCKQ MEVSEIHHPK SIRLHNPIYS  60
SCSDICAFHD VVHGNTRVVH RADEPDPTTP SQETRLIAKE SARTRSVSSR SSVYSVSGYS  120
HRSMQLRKLS GCYECRAVVD ASRYPIPRAS ICVCSQCGEV FPKIESLEHH QAVKHAVSEL  180
GPEDSSRNIV EIIFKSSWVK RDHPICKIER ILKVHNTQRT IQRFEDYRDT VKIRATAGAK  240
KNARCAADGN ELLRFHAATL ACSLGARGSS SLCGTGPACG VCTVIRHGFQ GNKIIGVRTT  300
ASSGRAHDCL GGTQTRRAML VCRVIAGRVK RVADDAPADE EPSGAGGAVG GTYDSIASVA  360
GVYSDLEELY VFSSRAILPC FVVIYKVIES
Cis-element ? help Back to Top
SourceLink
PlantRegMap678316030
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1825724e-43AC182572.2 Erythranthe guttata clone MGBa-75A14, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074673.10.0uncharacterized protein LOC105159339 isoform X2
TrEMBLA0A2G9GUH10.0A0A2G9GUH1_9LAMI; Uncharacterized protein
STRINGXP_006435171.11e-175(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51952334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-148C2H2-like zinc finger protein