PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678314722
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 305aa    MW: 33577.2 Da    PI: 6.6979
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678314722genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.7e-09262290129
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                      r +WTt++d +l  av+++G ++W+ Ia+
        678314722 262 RRPWTTDDDRKLEAAVQRHGERNWAHIAS 290
                      679************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.6E-10257302IPR009057Homeodomain-like
PROSITE profilePS512949.065257305IPR017930Myb domain
SuperFamilySSF466893.95E-8258301IPR009057Homeodomain-like
PfamPF002492.5E-7262290IPR001005SANT/Myb domain
CDDcd001672.13E-7264302No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MDHGPVLSKY KIVLSIHFLF CPLDWAGTHG LIVNRFAAGC PNRGMERRKG RIGEAQVCAL  60
LRRYSVSTVL AFLREVSQLA GRRIDWDELV RNTATGITSA RECQILWRHL AYGESLVKPP  120
GSDAEVEVGL FTCSLFCSTC DASNAGIIVH LNVTTDDDSD LEFEMEPSPA VGREAALEAA  180
ACVKVLMASC PSKDTDHPSN ATIEAPLTIN IPNCKAFEAE PLQPNSVPCT NISIPVTLQK  240
QPLGEKRPIS GVSPFEPARR KRRPWTTDDD RKLEAAVQRH GERNWAHIAS GEFFNDRKAS  300
ELSQV
Cis-element ? help Back to Top
SourceLink
PlantRegMap678314722
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084950.15e-81uncharacterized protein LOC105167083
RefseqXP_011084951.15e-81uncharacterized protein LOC105167083
TrEMBLA0A2G9HEQ93e-78A0A2G9HEQ9_9LAMI; Uncharacterized protein
STRINGMigut.F01437.1.p5e-75(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34342237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58220.12e-48MYB_related family protein