PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678301162
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 287aa    MW: 31455 Da    PI: 8.4666
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678301162genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.21.9e-1377121347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+ l++ + ++ G+g+W+ I+r   k+Rt+ q+ s+ qky
        678301162  77 PWSEEEHRLFLLGLHKVGKGDWRGISRNYVKTRTPTQVASHAQKY 121
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.08470126IPR017930Myb domain
SuperFamilySSF466892.09E-1672127IPR009057Homeodomain-like
TIGRFAMsTIGR015573.4E-1673124IPR006447Myb domain, plants
SMARTSM007175.0E-1074124IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.0E-1076121IPR009057Homeodomain-like
CDDcd001671.15E-977122No hitNo description
PfamPF002495.9E-1177121IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0046686Biological Processresponse to cadmium ion
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MADVEGKCSE DDGEKGFMLF GVKVLTEGSF RKSASMNNLA QFDSQPRDSN TDDAAGYDSD  60
DLVYPSAGNR ERKRGVPWSE EEHRLFLLGL HKVGKGDWRG ISRNYVKTRT PTQVASHAQK  120
YFLRRNNHTR RRRRSSLFDI TTDSVTVEEP MLEDTPNSDQ NTTSTFANPP IPSFPVVINP  180
VPVPVPVPSN LAFPQLNQLS NSPKPIRPIP ILPPSSNLAN LSLNRTTTIL PTSSLPLSTN  240
VPSPQSNQEQ QQQPSSQQAS PARRASAFQA IPGTFTESGG DGIISVA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00630PBMTransfer from PK17526.1Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678301162
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086441.11e-101transcription factor MYB1R1
TrEMBLA0A2G9HKS21e-99A0A2G9HKS2_9LAMI; Uncharacterized protein
STRINGMigut.L01371.1.p1e-87(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA114232225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.26e-59MYB_related family protein